Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00376 ATGATGATGAGAGGTATGACAGCCAAGAATTTTGACCCTATCAGATATTCAGGAAGATGGTTTGAAGTTGCTTCACTTAAACGTGGATTTGCTGGACAAGGCCAAGAAGATTGTCATTGCACTCAGGGTGTGTATACATTTGATAGGGAAGCACCAGCTATCCAAGTTGATACATTTTGTGTTCATGGAGGCCCTGATGGATTTATAACCGGAATTAGGGGAAGGGTTCAATGTCTTTCAGAAGAAGATTTGGTGAAAAATGAGACAGATCTAGAGAAGCAGGAAATGATCAAAGAAAAATGCTATCTCCGCTTTCCTACATTGCCATTCATTCCCAAGGAACCTTATGATGTGATTGCTACTGATTATGACAATTTTTCTCTTGTTTCAGGAGCTAAAGACAAAAGTTTTATTCAGATATACTCAAGGACACCTAACCCTGGACCTGAATTTATAGAGAAATACAAAGCTTACCTGGAAAACTTTGGATATGATCCAAGCAAAATTAAAGACACTCCCCAGGATTGCCAAGTAATGTCCAATAGTCAGCTGGCAGCTATGATGTCCATGTCTGGAATGCAGGAGGCATTAACAAACCAGTTTCCTGATCTAGGACTGAAGGCCCCTATTGAATTTAATCCCTTCACAAGTGTATTTGACACTTTTAAGAAGCTTCTTGAGCTTTATTTTAAGTAG 696 0.3922 MMMRGMTAKNFDPIRYSGRWFEVASLKRGFAGQGQEDCHCTQGVYTFDREAPAIQVDTFCVHGGPDGFITGIRGRVQCLSEEDLVKNETDLEKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFSLVSGAKDKSFIQIYSRTPNPGPEFIEKYKAYLENFGYDPSKIKDTPQDCQVMSNSQLAAMMSMSGMQEALTNQFPDLGLKAPIEFNPFTSVFDTFKKLLELYFK. 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00376 231 Pfam Lipocalin-like domain 14 174 IPR000566 -
Seca8g00376 231 ProSitePatterns Lipocalin signature. 10 23 IPR022272 -
Seca8g00376 231 SUPERFAMILY Lipocalins 7 187 IPR012674 -
Seca8g00376 231 Gene3D - 6 189 IPR012674 -
Seca8g00376 231 PANTHER LIPOCALIN 1 176 IPR002345 GO:0036094
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00376 Seca-Chr8 4270788 4273260 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00376 - - gmx:100787880 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00376 8 4270788 4273260 Seca8g00376 8 4270788 4273260 ECH