Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00344 ATGGAGAATACTGGAGGTGGTGCCTTTTTGAGGAATAGAAGGTTGGAAAGCTTCTTGGATACAAGCTCTGGCCAAAGAGTAGAAGAAACTCCAAGAATTTTAGTGAAAGATGAATCAGGACAAAGGCCAAGGAAGGATGTCTATACAGATGATGATGGCTGGGTTTTAACAATCATATCTTGGATCAGAATTGTCACATGTTTTGTGTCTATGATGGTCACAACATTCATATGGGCATTGATCATGGTTTTGCTTATTCCATGGCCTTATGAGAGGATTAGACAAGGAAACATTTATGGGCATGTGACTGGTAGAATGCTGATGTGGATTCTTGGTAATCCTATAAAGATTGAAGGTGCTGAGTACTGTAACGAGAGGGCCATTTACATCAGCAATCATGCATCTCCAATTGACATATTTCTTATAATGTGGTTGACTCCTACAGGCACAGTTGGCATTGCCAAGAAGGAGTCCTCAGTTGGGGTTGTATATGTTCTTGACAAAGCTATGGAAATGTATTTTCATCATTGGAAACAATTATTTTGTACATCAAGTTTGCTCATGAAAAAATGCATTAAAGCTTCAGAAACTATGCAGATAATATGGTATCCCCTATTTGGGCAACTTTATATTTTGGCCAACCATCTTCGCATAGACCGGTCTAACCCAGCTGCAGCTATTGAATCCATGAAAGAGGTATATAGCATTTTCCCTGCATTATCTACTACCACACACTTGTTTAAGGTTCTAATTTCTAATCATTGTAATGTTCAGGCAGCTCGTGCAGTTGTGAAAAACAATCTGTCCCTTATAATTTTTCCTGAAGGTACCAGGTCCAAGAATGGACGGCTACTTCCTTTCAAAAAAGGTTTTGTTCATTTAACACTGCAATCGCGCCTTCCAATTGTTCCAATGGTCCTGACAGGCACTCATCAAGCATGGAGGAAAGGCAGTTTGCATGTCAGACCAGCACCTCTTACTGTCAAGTATCTTCCTCCTATAAGCACTGAAAATTGGAAGGCTGATAACATTGATGAGTATGTCAAAATGGTGCACAACTTGTATGCTGAACACCTTCCTGAGACTCAGAGACCAATGCCTTGA 1104 0.4013 MENTGGGAFLRNRRLESFLDTSSGQRVEETPRILVKDESGQRPRKDVYTDDDGWVLTIISWIRIVTCFVSMMVTTFIWALIMVLLIPWPYERIRQGNIYGHVTGRMLMWILGNPIKIEGAEYCNERAIYISNHASPIDIFLIMWLTPTGTVGIAKKESSVGVVYVLDKAMEMYFHHWKQLFCTSSLLMKKCIKASETMQIIWYPLFGQLYILANHLRIDRSNPAAAIESMKEVYSIFPALSTTTHLFKVLISNHCNVQAARAVVKNNLSLIIFPEGTRSKNGRLLPFKKGFVHLTLQSRLPIVPMVLTGTHQAWRKGSLHVRPAPLTVKYLPPISTENWKADNIDEYVKMVHNLYAEHLPETQRPMP. 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00344 367 CDD LPLAT_AGPAT-like 105 345 - -
Seca8g00344 367 SMART plsc_2 127 310 IPR002123 GO:0016746
Seca8g00344 367 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 200 362 - -
Seca8g00344 367 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 58 157 - -
Seca8g00344 367 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 61 364 - -
Seca8g00344 367 Pfam Acyltransferase 198 307 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00344 Seca-Chr8 4003710 4007067 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00344 18 318 Acyl Lipid Metabolism Gene Families AT4G30580 22.364 6.40e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00344 - - pcin:129318885 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00344 8 4003710 4007067 Seca8g00344 8 4003710 4007067 ECH