Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00302 ATGTCTTCTTCTTCTTCTTCTTCTTCTGCCTTACCATTATTAACCATTTTGATATTGTCCTTTCTCTCCATTGCCACTGGTAGTGACAAGTCTCAATCTTGCAGTGATGACTTTACTAAACTTGCCAGTGTAAAGAACATCACAGAGTGCAAAAGATTGCGCACTCTTGGGGCAGAGTTTGGGTGGAAGTACCATAATTGCACAAACTCCACCACACTTGAAATCTTGTTTGGTGCCAAGCTGGACAACTCTGAAGGGTGGATAGCATGGGGGGTGAATCCAGGTAAAAGGGCAGAGATGATTGGAACACAAGCTCTCATAGGGATTAAACACTCAGATAAACCATTGAGAGTAAGGACATACAACATTACAAGTGTGATCAGAAATGGTTGCAATCTTCTGCCATCAAATATATCAGTGCAAGTATCTAATATGGAAATGCAACATGAAGGGTCTAATTTATACACTATATATGCTAGATTGGTCCTCCCTTCAGATAAGTATAACATTACAAGGCTACACCATGTGTGGCAAGTTGGGAGTGCAGTTTCAGAGGACCAACCCCTGTACCATCCAATAACACTGCAGAATGTTGACAGCACAGAGACCATAGACTTGACTTCTAGTGGTGGTCGCAGCACTGGACAGTACCGGAGTTTCCTTAGAACGATTCAGGTACATGGAGTTCTAAACATTATTGGGTGGGGAACACTGTTACCAATTGGAATTATAATTGCGAGGTACTTTCGAGTGTTTCCTTTTAAATGGGAGCCAATGTGGTTTTACCTGCACATTGGATGCCAATTAACTGGTTTTCTCATTGGCACCGCTGGTTGGATTATTGGACTAAGCCTTGGACATGCTTCAAGATACTACACCTTCCACACTCATCGAATCTATGGCATTATCATATTCACATTTAGCACAGTCCAAATGTTTGCTTTTCGCTTGAAGCCCAAAATGACTGATGATTACCGTAAATATTGGAATATGTACCATCATTTTCTTGGGTATGGACTGTTGGTTATCATAATCATAAATATATTCAAGGGAATTTCCATTTTGAAAGGGGGACAAGGATGGAAGTGGGGTTACATTGGAATTCTCACACTTTTGGGTGCCATTGTATTTGGTTTGGAGATTTTCACATGGGTTCGCTTCTTCATGCTGAAAACAACACAAAACCAGCCAAATAAAGACAAGTCAGACGATGGAACCAAGCGAAAGACATCATCCAAATAG 1242 0.4098 MSSSSSSSSALPLLTILILSFLSIATGSDKSQSCSDDFTKLASVKNITECKRLRTLGAEFGWKYHNCTNSTTLEILFGAKLDNSEGWIAWGVNPGKRAEMIGTQALIGIKHSDKPLRVRTYNITSVIRNGCNLLPSNISVQVSNMEMQHEGSNLYTIYARLVLPSDKYNITRLHHVWQVGSAVSEDQPLYHPITLQNVDSTETIDLTSSGGRSTGQYRSFLRTIQVHGVLNIIGWGTLLPIGIIIARYFRVFPFKWEPMWFYLHIGCQLTGFLIGTAGWIIGLSLGHASRYYTFHTHRIYGIIIFTFSTVQMFAFRLKPKMTDDYRKYWNMYHHFLGYGLLVIIIINIFKGISILKGGQGWKWGYIGILTLLGAIVFGLEIFTWVRFFMLKTTQNQPNKDKSDDGTKRKTSSK. 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00302 413 ProSiteProfiles Cytochrome b561 domain profile. 189 388 IPR006593 -
Seca8g00302 413 Pfam Protein of unknown function (DUF568) 100 206 IPR045265 -
Seca8g00302 413 CDD Cyt_b561_FRRS1_like 189 381 - -
Seca8g00302 413 Gene3D - 206 391 - -
Seca8g00302 413 PIRSF UCP037471 4 413 IPR017214 -
Seca8g00302 413 Pfam Eukaryotic cytochrome b561 226 352 IPR006593 -
Seca8g00302 413 CDD DOMON_CIL1_like 50 208 IPR045265 -
Seca8g00302 413 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 14 396 - -
Seca8g00302 413 ProSiteProfiles DOMON domain profile. 56 180 IPR005018 -
Seca8g00302 413 SMART 561_7 226 352 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00302 Seca-Chr8 3564576 3568147 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00302 - - gmx:100791697 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00302 8 3564576 3568147 Seca8g00302 8 3564576 3568147 ECH