Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00278 ATGAGAGATTTGAATACGGATCATAGCTGTAGTTCACCAAGAACGCCGAATTTTCGGCAAAGAAGACGCTCAAATGAGTTTCCTCCTGAGATAAGCAAATCAAATGGAAACCATTTACTACTTGTAAATGATAAATATAAGTACAGATCAATGTGGATCCGAGCATACTCATCTCTGTGGATGCTAGCAAGTGTCTCACTTATCATATACTTGGGTCATCTTTACATCTGGGCCATGGTTGTAATTATCCAAATATTTATGGCCAGTGAGCTCTTCAATCTACTGAGAAGAGCTACTCAAGATAAACGTCTCCCTAGGTTTAAGCTCTTGAACTGGCATTTTTTCTTCACAGCAATGCTATACGTGTATGGCCGTATTCTCAGTCAACAACTTGTGAATACAGTGACCTCAGATAAATTCTTCTATAGACTTGTGAGCAACCTCATCAAGTATCAGATGGTTATATGTTACTTCTTATACATTGCAGGTTTTGTATGGTTTATCCTTTCATTGAAGAAGAGATATTACAAGTATCAATTTGGCCAGTATGCATGGACACATATGATACTTATTGTTGTGTTTACCCAGTCTGCATTCACTGTAGGCAATATATTTCAAGGGATATTCTGGTTTGTTTTCCCTGCATCCCTTATTGCTATGAATGATGTTGCTGCATATTTCTTCGGTTTCTTCTTTGGGAGAACACCTCTGATCAAGCTATCTCCAAAGAAAACATGGGAAGGTTTTATTGGAGCATCTGTTGCCACTATGATTGCTGCATTTACGTTTGCAAACTTCTTGGGTCGCTTCCAGTGGCTAACATGTCCAAGGAAGGATTTATCAACTGGTTGGCTTCGGTGTGACCCTGACCCAATTTTTAAGCCAGAGTACATTCCATTGCCAGGATTCATTTCTCACTGGTTGCCTTGGAAAGAGATAGCAGTTTTACCAATACAGTGGCATGCCTTGTGGCTGGGACTATTTGCATCCATCATAGCACCATTTGGAGGATTTTTTGCTAGTGGTTTCAAAAGAGCTTTTAAAATCAAGGACTTTGGTGACAGTATACCCGGACATGGTGGATTTACTGACAGAATGGACTGCCAGATGGTAATGGCTGTTTTTGTTTACATTTACCATCAATCATTTGTTGTCCCCCAAGACTATTCCGTTGAGATGTTTTTGGGCCAGATAATGAGGGACCTTGGTTTTGAGGAGCAGCTAGCTCTATACACAAAACTTGGACATATAATACAAGAAAGACGTTTTATCCAGACATGA 1281 0.3973 MRDLNTDHSCSSPRTPNFRQRRRSNEFPPEISKSNGNHLLLVNDKYKYRSMWIRAYSSLWMLASVSLIIYLGHLYIWAMVVIIQIFMASELFNLLRRATQDKRLPRFKLLNWHFFFTAMLYVYGRILSQQLVNTVTSDKFFYRLVSNLIKYQMVICYFLYIAGFVWFILSLKKRYYKYQFGQYAWTHMILIVVFTQSAFTVGNIFQGIFWFVFPASLIAMNDVAAYFFGFFFGRTPLIKLSPKKTWEGFIGASVATMIAAFTFANFLGRFQWLTCPRKDLSTGWLRCDPDPIFKPEYIPLPGFISHWLPWKEIAVLPIQWHALWLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDRMDCQMVMAVFVYIYHQSFVVPQDYSVEMFLGQIMRDLGFEEQLALYTKLGHIIQERRFIQT. 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00278 426 PANTHER PHOSPHATIDATE CYTIDYLYLTRANSFERASE 19 423 IPR016720 GO:0004605
Seca8g00278 426 MobiDBLite consensus disorder prediction 1 31 - -
Seca8g00278 426 Pfam Cytidylyltransferase family 53 383 - -
Seca8g00278 426 ProSitePatterns Phosphatidate cytidylyltransferase signature. 341 367 IPR000374 GO:0016020|GO:0016772
Seca8g00278 426 PIRSF CDP-DAG_synth_e 3 426 IPR016720 GO:0004605
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00278 Seca-Chr8 3355272 3360061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00278 2 421 Lipid Metabolism Gene Families AT4G26770 74.645 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00278 K00981 - gmx:100805363 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00278 8 3355272 3360061 Seca8g00278 8 3355272 3360061 ECH