Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00255 ATGGCGACGGCTGATTCCGACGCTATCACTGAGCCTCAGCCTCAGCCTCAGCCTCAGGATTCTTCTGACTCTGTTTCCAATCCTCCTTCAAACGCCCTTGTCCCCGCTACTCCTGCCGTTTGCCTACTCCGCTTCGCCGCCGACTCTGCCGGTGGTGCTTTCATGGGCTCCGTCTTTGGATACGGTGCTGGATTGTTTAAGAAAAAGGGTTTTAAAGGATCCTTTGTTGAAGCGGGGTCTTATGCAAAGACTTTTGCAGTTTTGTCTGGAGTTCATAGCTTGGTTGTTTGCATCTTGAAAAGACTTCGAGGAAAGGATGATGTCATTAATGCGGGGGTAGCTGGATGTTGCACTGGTCTTGCTCTAAGTTTTCCAGGTGCACCACAAGCTCTTCTGCAGAGCTGCCTCACTTTTGGGGCATTTTCATTTATTATGGAAGGGCTAAACAAGCAGCAGCCAGCACTTGCACTTCCCATGTCCTGGAAAAGAACTGCACAACACAATGCACGTCTTCCCTCGGTACTCCCCCTCCAACTCCCCCTTCCTGATGAAATGAAAGGAGCCTTCTCCTTTTTTTCCGAGACCTTGAAAAAGCGCAACAAGGGAACTTATCCTACATCTCAATAA 627 0.4928 MATADSDAITEPQPQPQPQDSSDSVSNPPSNALVPATPAVCLLRFAADSAGGAFMGSVFGYGAGLFKKKGFKGSFVEAGSYAKTFAVLSGVHSLVVCILKRLRGKDDVINAGVAGCCTGLALSFPGAPQALLQSCLTFGAFSFIMEGLNKQQPALALPMSWKRTAQHNARLPSVLPLQLPLPDEMKGAFSFFSETLKKRNKGTYPTSQ. 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00255 208 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 11 168 IPR039175 GO:0042721|GO:0045039
Seca8g00255 208 MobiDBLite consensus disorder prediction 6 30 - -
Seca8g00255 208 MobiDBLite consensus disorder prediction 1 30 - -
Seca8g00255 208 Pfam Tim17/Tim22/Tim23/Pmp24 family 49 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00255 Seca-Chr8 3136861 3139165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00255 20 201 Miscellaneous Gene Families AT4G26670 67.380 2.70e-83 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00255 K17790 - gmx:100813557 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00255 8 3136861 3139165 Seca8g00255 8 3136861 3139165 ECH