Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00181 ATGACACAGAATCACATGACCCGATTCCATCAAAAGATTTATAGTCACAGTAGCACAGGAACGCAGCCTCCTCTAACATCATCAAACCCCTCGAAAGAGGAAAGAGCGCAAACACACTTGGTTCATTCTCTTCACTCTTTTGGTCTCAAAGGTCGAAACTTTAATCGTTTAACGTTGTGGGCTATGATGATGGCGAGCAATAGAGAGAGAGAAGAAGCCCTCACATTCACAATCCCTTCATCTTCTTCCCATTCTTCCCCTATCACCGTCTCCGACCAACTCGATAGCTACCTCACCGACCCCAGAAGCGCTTCTGGAAGCTTCCAGAACGAGGGTCTTCTATCCGCCGGAGACGTCGCCGTCGATTCCGAGTTCGGGTTCTCCCGGCCCGATTTCCGACAGAGTCCTCTGGTTGGCACGGTTGAGTTGTACGAACGCCACGTGTTCCTCTGCTACAAGAACCCACGGGTTTGGCCACCACGCATCGAAGCTGCAGAGTTTGATCGCTTGCCCAGGTTGCTCTATGCAGCCGTTATGGCAAGGAAGAGCCATATGAAGAAGGAGACCCGCTTGACGATATGTGAGGGACATGATGGGACTGAAACATCTAATGGGGATGTGTTAATCTTTCCTGACATGATCAGATACAGGAGATTAACGCATTTTGATGTTGAAACTTTTGTTGAAGAAGTTCTTGTGAAGGATGGAGAATGGCTTCCTGGAACCCCTGAAGCGTTGAAAGGTTCATATGTTTTTGTGTGTTCACATGGTTCCCGTGATCGTAGATGTGGGGTTTGTGGACCTGTCTTGGTCAGTAGATTCAGGGAGGAGATAGAGTTACATGGTCTTCAGGGTAAAGTGTTTGTTAGCCCGTGCTCACATATTGGGGGACATAAGTATGCAGGAAATGTCATTATATTTGGGTCTAGCATGAATGGAGAAGTCACTGGACACTGGTATGGATATGTTGCCCCAGAAGATGTACCTCTATTGCTTCAACAACATATCATAAAAGGGGAGGTTATAGACTTATTATGGAGGTAA 1044 0.4713 MTQNHMTRFHQKIYSHSSTGTQPPLTSSNPSKEERAQTHLVHSLHSFGLKGRNFNRLTLWAMMMASNREREEALTFTIPSSSSHSSPITVSDQLDSYLTDPRSASGSFQNEGLLSAGDVAVDSEFGFSRPDFRQSPLVGTVELYERHVFLCYKNPRVWPPRIEAAEFDRLPRLLYAAVMARKSHMKKETRLTICEGHDGTETSNGDVLIFPDMIRYRRLTHFDVETFVEEVLVKDGEWLPGTPEALKGSYVFVCSHGSRDRRCGVCGPVLVSRFREEIELHGLQGKVFVSPCSHIGGHKYAGNVIIFGSSMNGEVTGHWYGYVAPEDVPLLLQQHIIKGEVIDLLWR. 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00181 347 MobiDBLite consensus disorder prediction 1 37 - -
Seca8g00181 347 CDD TRX_Fd_Sucrase 248 347 IPR009737 -
Seca8g00181 347 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 96 347 IPR009737 -
Seca8g00181 347 SUPERFAMILY Thioredoxin-like 250 345 IPR036249 -
Seca8g00181 347 FunFam APD1p protein 248 347 - -
Seca8g00181 347 Pfam Sucrase/ferredoxin-like 137 347 IPR009737 -
Seca8g00181 347 Gene3D Glutaredoxin 144 239 - -
Seca8g00181 347 Gene3D Glutaredoxin 248 346 - -
Seca8g00181 347 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00181 Seca-Chr8 2275158 2276776 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00181 - - gmx:100816329 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00181 8 2275158 2276776 Seca8g00181 8 2275158 2276776 ECH
Seca8g00181 8 2275158 2276776 Seca8g00181 8 2275158 2276776 PCT