Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00176 ATGGCTGGGGTCGTCGGAGACACATTTCCTGTGCCTCTCAAGGAACATGAATCTAAACCTGACATAACTGATGACACAGAGGTGGATGACAATCCCATTGAGGAGGTCAGGCTCACAGTACCAATAACCGACGACCCTACTCAGCCAGCACTTACATTTAGAACATGGGTTCTGGGTTTGGCTTCCTGTGTTATCCTTGCATTTGTGAATGAGTTTTTTGGCTACAGAGAAAACCCTCTATATGTTTCTTCTGTCTCAGCCCAGATTGTTTCCCTCCCACTTGGGAAGTTGATGGCTGCAACACTTCCCACCAAACAATTTAATGTCCCATTCACTAAGTGGTCTTTTACATTGAATCCTGGGCCATTCAATTTGAAAGAACATGCACTTATCACCATCTTTGCCAGTGCTGGATCTAGTGGTGTTTATGCAATTAACATTATCACAATTGTCAAGGCTTTCTACCACAGAAGCATCCATCCATTGGCAGCTTTTTTGTTAGCAATGTCAACCCAGATGCTTGGTTATGGATGGGCTGGGATATTCAGAAAATTCCTTGTGGACTCTCCATATATGTGGTGGCCTGCAAACCTTGTCCAGGTGTCTCTATTCAGGGCATTTCATGAAAAAGAAAAGAGGCCTAAAGGAGGAAACACTAGGCTGCAATTCTTTCTCCTAGTCTTTGTTGCTAGCTTTGCTTATTATATCATTCCTGCATACTTTTTTCAAGCAATTACAACTATCTCCTTCGTTTGCTTGATTTGGAAAAACTCCATCACTGCACAACAAATAGGTTCAGGCATGAGAGGTCTTGGAATTGGCTCATTTGGCCTTGATTGGAACACGGTTGCTGGCTTCTTAGGCAGTCCCTTGGCTGTACCTGGCTTTGCTATCATCAACATTCTGGTTGGATTTGTGCTGTTTATCTATGTTTTGGTTCCCATTGCTTATTGGAACAATTTATATGATGCCAAAAAGTTTCCCATCATTAGTTCCAAAACATTTGACTCCACTGGTGCAAAATATAATGTTTCTAGTATTCTGAATACTGAAACTTTTGACATTGATTTGGATAGTTATAACAATTACAGCAAGCTCTACCTTAGTATCACATTTGCATTTGACTATGGATTGAGCTTTGCAACTCTGACTGCCACCATTTCACATGTTGTCCTCTTCCATGGAAAAACAATTCTTCAGATGTGGAAGAAGACAACAGCTGCACTGAAAGGACAAGGTGGAGATGTGCACACAAGAATTATGAAGAAAAACTATGAACAGGTCCCCGAATGGTGGTTTGTCACCATTTTGGTGATAATGGTTATTATGGCCTTGATATCTTGTGAAGGATTTGGCAAGCAGCTCCAACTGCCATGGTGGGGAGTGTTACTTTCTCTAGTAATTGCGTTAGTCTTCACTTTGCCAATTGGTGTTATTCAAGCAACAACAAATATGGTAATGTCCATTGTCCAAGTAGAACAAGCTGGACTCAACGTGATCACAGAGTTAATAATTGGGTATCTCTACCCGGGAAAGCCCCTTGCAAATGTTGCCTTCAAGACTTATGGATACATAAGCATGTCACAGGCACTCGGGTTTCTTGGTGATTTCAAATTGGGCCACTATATGAAAATTCCTCCAAAATCCATGTTCATTGTACAGTTGGTAGGAACTGTAGTTGCTTCAAGTGTTTACTTTGCCACAGCATGGTGGCTTCTGACAACTATTCCTCACATATGTGATGAGACATTGTTGCCAAAGGGTAGTCCATGGACATGTCCTGGTGATGATGTGTTTTATAATGCTTCAATCATATGGGGAGTAGTTGGACCACAAAGAATGTTTACCAAGGATGGCATTTACCCTGGCATGAATTGGTTTTTCCTCATTGGTCTACTTGCTCCTGTTCCAGTGTGGCTGTGTGCACGCAAATTCCCCAATCAAAAGTGGATTGAACTCATCAACATGCCTATCATCATTGCAGGTGCTAGTGGCCTCCCACCAGCCAGATCAGTGAATTATATCACATGGGGAATTGTTGGTATCTTCTTCAATTTCTTTGTTTATAATAAGTACAAGGCATGGTGGGCTAGACATACATACATTCTTTCAGCTGGTTTAGATGCTGGAGTTGCCTTCACGGGTGTGTTGCTCTATTTTACCCTCCAAACTTTTGATATTTTTGGTCCACAATGGTGGGGTCTTGATGCAGATGACCACTGCTATTTGGCATCATGCCCCACAGCTCCTGGTGTTATTGCTGCTGGGTGCCCTGTTCTCTGA 2283 0.4218 MAGVVGDTFPVPLKEHESKPDITDDTEVDDNPIEEVRLTVPITDDPTQPALTFRTWVLGLASCVILAFVNEFFGYRENPLYVSSVSAQIVSLPLGKLMAATLPTKQFNVPFTKWSFTLNPGPFNLKEHALITIFASAGSSGVYAINIITIVKAFYHRSIHPLAAFLLAMSTQMLGYGWAGIFRKFLVDSPYMWWPANLVQVSLFRAFHEKEKRPKGGNTRLQFFLLVFVASFAYYIIPAYFFQAITTISFVCLIWKNSITAQQIGSGMRGLGIGSFGLDWNTVAGFLGSPLAVPGFAIINILVGFVLFIYVLVPIAYWNNLYDAKKFPIISSKTFDSTGAKYNVSSILNTETFDIDLDSYNNYSKLYLSITFAFDYGLSFATLTATISHVVLFHGKTILQMWKKTTAALKGQGGDVHTRIMKKNYEQVPEWWFVTILVIMVIMALISCEGFGKQLQLPWWGVLLSLVIALVFTLPIGVIQATTNMVMSIVQVEQAGLNVITELIIGYLYPGKPLANVAFKTYGYISMSQALGFLGDFKLGHYMKIPPKSMFIVQLVGTVVASSVYFATAWWLLTTIPHICDETLLPKGSPWTCPGDDVFYNASIIWGVVGPQRMFTKDGIYPGMNWFFLIGLLAPVPVWLCARKFPNQKWIELINMPIIIAGASGLPPARSVNYITWGIVGIFFNFFVYNKYKAWWARHTYILSAGLDAGVAFTGVLLYFTLQTFDIFGPQWWGLDADDHCYLASCPTAPGVIAAGCPVL. 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00176 760 NCBIfam small oligopeptide transporter, OPT family 29 724 IPR004648 GO:0055085
Seca8g00176 760 NCBIfam OPT family oligopeptide transporter 34 723 IPR004813 GO:0035673
Seca8g00176 760 MobiDBLite consensus disorder prediction 1 25 - -
Seca8g00176 760 Pfam OPT oligopeptide transporter protein 51 721 IPR004813 GO:0035673
Seca8g00176 760 PANTHER ISP4 LIKE PROTEIN 25 759 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00176 Seca-Chr8 2219949 2223716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00176 14 760 Organic Solute Cotransporters AT5G55930 67.377 0.0 1043
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00176 - - gmx:100776230 1353.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00176 8 2219949 2223716 Seca8g00176 8 2219949 2223716 ECH