Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00175 ATGTCAATGGGTTTGTTGAGTTGTTTTTTAATTTTGTTTGCAGATACTTTTCATGAGGTAAGAAGGAGACGTGACCGAAAGAAGGAGGGATTGAGCAGCAGGGCTTCTGAGGAGTCTAGGTTAAAGCACGGTGGACAGGGGAGGGGGGGAAGGGGTTCTTCAGGGGGCTATTGCTCCAACTTTCCTGATGGTGGTGGTGGACGGAACCTTTCTATTCGAAGGGAAAATGGAGTCAATCACATTGCAGAAAGAAATCATGTTCCCTCTACTCAGCCAGATTTGCAGAAGAAAGCTAATACAGCATCTCAAGCCGCAAGAGGTTCAGCTGTTGCACTTGCACCCCATGGTGCAGAAAATCAATCCAATGGGAAGTCTGGTCATGGTTCCACCGGCCAATCTCTCATAGGTAGTATAATAAGTGCCCCCAAAAGCAATTCAGGTGCTAATCACACGGGCAATCAAGAAAATGTCCAACCTCAAGCTGCTGTTGTTGCAGCATCCGCTTCCCCTACTCAAACCTTTGGCTCAGTTACCAGCAGTGACCAAAGAAAGTCTTTGTCAAGTTCTGATCAACTTCAAAATTCTGTATCTGGTGTCTATTCCTCTTCTTCGGATCCTGTACTGGCACCATCTATTTCCCGAAGTCCTGTTGCCAGTGGTGCTATTAGTAGGGAAGTTGGGAGTAATCGGATATCTGCTGGGCCAAATCATGTTAAAGGAAACAAACATCTAGAAGCTGGTGATTTATCAGCATCCAAAAATGAAAAATCTGGGTTGATGAATTCAACAAGCAACTTGAATGCCCCACAGAAGTCAAATGAAGTTGAAAATAATCAGTTATCCGAGCCTTCACAATACTCATCCTCTTCATCCCTGAATGGTTCTTTGAGGCCATCTTCCAGTTGCGGTAGCCAACCAGCTCCAGCCAATGTCACAGAGGTTTCAACTTCAGAAGCTTGTGTGCAATCTTCAGCTGAGTTGAGGCAACATGTTACTTTCCCAAACCATTTCCAAGTACCTGAGGCTTTGAAAAGTGGTCTGACATTTGGAAGCTTTGATACTTTTGGCCCTAGTGAAAGATCTAGCAGTGGAACTGGTTGTGACAATAACACTTCTCCTGCTTCTCTAGGGAACGATGAAGCTACTACTTCTAGCAACCAAAGTGCGTCATTGAGTGCTCAAGGAGATCATCTTGATTATACACATTCTGCATCTTATCTGATTAACAAGACACCAGCTTCAGAAAGCAATTCTATAACTGGTACTGACTCAAAGATTGATCAGCCAAAGCAGGAGGTATTGTTAGCTCCTGAGGGCCATCCAATTCTGACTGTTCAAAATGCTCAAAACTATGGTTTGAATTTCATGTCAACCATGTTAGGGACCCAGCAAGTTCAATTTGAGGGAACTGAGCCTCAGACCCAAGAAACATCGCGTTTTCCTAACTTTGTTAGTGCAAGTTCTCAGGCTGTGTCCCATAGCCCAACCCCACCTCTGCAGCAGAGCTCTATTCCCGTGTCTCCACAGTCAGTTTCTATTTTCAGGCCACCATACCCAGCTAACTACTTCCCATATGGCCACTATTACCCCCCAATTTATGTGTCTCCAGTACACCAATTTTTAAGCCACAATGGTTTCCCTCAACAGCCGTCAGCTGGCAACATGTATCTACCAGCTGCTGCTGCAGCTGCCGGGATCAAATTTCCTCTTCCTCAATTCAAGACTGGAGCAAATGCAGGAAACACGGCTCATTGGAATTCCTTCTGGATCATTTATCACTCCACCACCTGTTGGATATGCTCCTGGTCCGACAGTTAA 1818 0.451 MSMGLLSCFLILFADTFHEVRRRRDRKKEGLSSRASEESRLKHGGQGRGGRGSSGGYCSNFPDGGGGRNLSIRRENGVNHIAERNHVPSTQPDLQKKANTASQAARGSAVALAPHGAENQSNGKSGHGSTGQSLIGSIISAPKSNSGANHTGNQENVQPQAAVVAASASPTQTFGSVTSSDQRKSLSSSDQLQNSVSGVYSSSSDPVLAPSISRSPVASGAISREVGSNRISAGPNHVKGNKHLEAGDLSASKNEKSGLMNSTSNLNAPQKSNEVENNQLSEPSQYSSSSSLNGSLRPSSSCGSQPAPANVTEVSTSEACVQSSAELRQHVTFPNHFQVPEALKSGLTFGSFDTFGPSERSSSGTGCDNNTSPASLGNDEATTSSNQSASLSAQGDHLDYTHSASYLINKTPASESNSITGTDSKIDQPKQEVLLAPEGHPILTVQNAQNYGLNFMSTMLGTQQVQFEGTEPQTQETSRFPNFVSASSQAVSHSPTPPLQQSSIPVSPQSVSIFRPPYPANYFPYGHYYPPIYVSPVHQFLSHNGFPQQPSAGNMYLPAAAAAAGIKFPLPQFKTGANAGNTAHWNSFWIIYHSTTCWICSWSDS. 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00175 605 MobiDBLite consensus disorder prediction 22 45 - -
Seca8g00175 605 PANTHER FLOCCULATION PROTEIN (DUF1296) 12 307 IPR044277 -
Seca8g00175 605 MobiDBLite consensus disorder prediction 252 310 - -
Seca8g00175 605 MobiDBLite consensus disorder prediction 22 220 - -
Seca8g00175 605 MobiDBLite consensus disorder prediction 254 310 - -
Seca8g00175 605 MobiDBLite consensus disorder prediction 83 106 - -
Seca8g00175 605 MobiDBLite consensus disorder prediction 485 505 - -
Seca8g00175 605 MobiDBLite consensus disorder prediction 118 210 - -
Seca8g00175 605 MobiDBLite consensus disorder prediction 355 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00175 Seca-Chr8 2207681 2215291 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00175 - - gmx:100819602 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00175 8 2207681 2215291 Seca8g00175 8 2207681 2215291 ECH