Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00173 ATGGCTAAGATTGCTGTTACCCCAACAATTGTCCTAGCAGAATTCATACTTTACAAAAAAACCATTTCTTTTAATAAGGTTGTGGCTTTGGCTGTTGTATCAGCAGGGGTAGCTGTTGCAACTGTAACAGATTTAGAGTTCAATCTATTTGGTGCTCTAGTTGCAATTATATGGATAATCCCAAGTGCCATAAATAAGATTTTATGGTCTACTTTACAACAACAAGGCAACTGGACAGCTCTGGCATTGATGTGGAAGACTACACCAATCACAGTTTTCTTCCTAGGGGCTTTAATGCCCTGGATAGATCCACCAGGAATCCTATCCTTCAAGTGGGATGTAAACAACTCAACTGCTATTTTGGTATCAGCTCTTCTTGGTTTTCTCTTACAGTGGTCAGGTGCCTTGGCATTAGGGGCAACTTGTGCTACAACTCATGTTGTTTTAGGACAGTTTAAAACATGTGTCATTCTGCTGGGAGGCTATATATTATTCAGCTCAGATCCTGGGTTTGTGAGCATTGGTGGGGCTGTTGTTGCTCTCTCTGGAATGTCAGTTTACACAACATTGAACTTGCATGAGTCTAAGGAAAATACAAGCAAGCAACTTCCAAAGCAAATTTTGCCTTCCTCAAAGCCGAAATCAGCTAGTGAAGACAGCACAGATTTGAATGTAAATATTACCACAGCTGTTGTCTGA 699 0.4063 MAKIAVTPTIVLAEFILYKKTISFNKVVALAVVSAGVAVATVTDLEFNLFGALVAIIWIIPSAINKILWSTLQQQGNWTALALMWKTTPITVFFLGALMPWIDPPGILSFKWDVNNSTAILVSALLGFLLQWSGALALGATCATTHVVLGQFKTCVILLGGYILFSSDPGFVSIGGAVVALSGMSVYTTLNLHESKENTSKQLPKQILPSSKPKSASEDSTDLNVNITTAVV. 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00173 232 PANTHER SOLUTE CARRIER FAMILY 35 3 191 - -
Seca8g00173 232 MobiDBLite consensus disorder prediction 197 220 - -
Seca8g00173 232 Pfam Triose-phosphate Transporter family 9 187 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00173 Seca-Chr8 2200752 2202349 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00173 5 218 Organic Solute Cotransporters AT1G77610 23.744 4.69e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00173 - - tpra:123921378 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00173 8 2200752 2202349 Seca8g00173 8 2200752 2202349 ECH