Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00137 ATGATTGGGAGGGGAGCTTTCTCGTCAATTTTGAAGCGCAGCAAAGAAGCATGTCTAATTCATAAGCTAAGGGGGACGAGGCCTTTCTCTCATCCTTCCGGTGAAGGATCATTCAAGTTCTTCACTCCTTCCATTGCCAACCATTGTTTTCGATCCAATCATATTCCTAAGGGTCATCATGTGCCATACATGAGGAACTTTTCTAGGATGGTGTCTGCTGGTGCTGGTGCTGGAGCTGAACATAAGGAGGGGTTGAAGCTGCTTGTGGCAGGGGGTGCTCATGCCCAGAAAGTGGTTGGAATATGGCTCTTTGGCTCTGCCGCATGGGTGTTTAGCATGGTGGTACTTGGGGGTTTAACCAGACTCACTAGATCTGGTCTTTCAATGACTGATTGGAAATTCACGGGTACTCTCCCTCCTTTGTCAGATGAGGAATGGTTACAGGAGTTTGAGAAATATAAGCAGTCACCTGAATACAAGCGTGTTAATAGAGGGATGAAGATTGAAGAATTCAAGTTCATTTATTGGATGGAATATGCACATCGCATGTGGGGAAGGGCACTGGGAGTCATGTTTGCCTTGCCATATTCATATTTTCTCCATAAGGGGTATATTACCATGAGATTAGGACTGAGACTCTCTGCTCTATTTGCCCTTGGTGCTGGGCAGGGTCTCATTGGCTGGTGGATGGTTAAAAGTGGTTTAGAGGAACCACCATCTGAATATTCTCAACCAAGGGTAAGCCCTTATCGTCTTGCAGCTCACCTTACATCAGCATTTGCTATTTACTGCGGCCTCTTTTCGACTGCACTTTCTGTTGTTATGCCAGAACCACCAGCTGAATCACTATCGTGGGTTCGTGGGGCAGCTAAAGTGAAGAGACTTGCACTGCCTATCAGCCTACTTGTTGGTCTTACTGCTGTCTCTGGTGCATTTGTTGCTGGAAATGATGCTGGGCATGCATTTAATACTTTTCCAAAGATGGGTGATACATGGATACCAGAAGACATTTTTGAAATGAAACCTCTTATTCGAAATTTCTTTGAGAATACATCAACTGTACAGGTAATTATCCATGCTGATTTATCGTTGATAAGTTAA 1101 0.445 MIGRGAFSSILKRSKEACLIHKLRGTRPFSHPSGEGSFKFFTPSIANHCFRSNHIPKGHHVPYMRNFSRMVSAGAGAGAEHKEGLKLLVAGGAHAQKVVGIWLFGSAAWVFSMVVLGGLTRLTRSGLSMTDWKFTGTLPPLSDEEWLQEFEKYKQSPEYKRVNRGMKIEEFKFIYWMEYAHRMWGRALGVMFALPYSYFLHKGYITMRLGLRLSALFALGAGQGLIGWWMVKSGLEEPPSEYSQPRVSPYRLAAHLTSAFAIYCGLFSTALSVVMPEPPAESLSWVRGAAKVKRLALPISLLVGLTAVSGAFVAGNDAGHAFNTFPKMGDTWIPEDIFEMKPLIRNFFENTSTVQVIIHADLSLIS. 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00137 366 PANTHER CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15 68 356 IPR023754 GO:0006784|GO:0016020|GO:0016653
Seca8g00137 366 Pfam Cytochrome oxidase assembly protein 101 357 IPR003780 GO:0006784|GO:0016020|GO:0016653
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00137 Seca-Chr8 1694427 1698176 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00137 K02259 - gmx:100786107 604.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00137 8 1694427 1698176 Seca8g00137 8 1694427 1698176 ECH