Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00071 ATGGGGTTCTCATTGAAGCATGTATTGGTGTTTGTGTTAATTGGGGCGTTGTTGAATTTGAAAGGGTCAGAGGGGATCAGATTTGTGATAGACAGAGAAGAGTGTTTCTCCCATGATGTCAAGTACGAGGGTGACACTGTCCATGCTTCTTTCGTTGTTATTAAGGCTGATTCTCCCTGGCATTACGGTGACGAAGGTGTCGATCTCGTGGTAAAGGGACCTGCTGGTGATCAAATTCAAGATTTTCGTGACAAGACCAGTGAAAAGTTCGACTTTGTGGCTCACAAATCAGGGGTGCATAAATTCTGCTTCACAAATAAGTCTCCTTATCATGAAACCATTGATTTTGATGTACATGTTGGTCACTTCTCTTACTTTGAGCAACATGCAAAAGACGAGCATTTCACCCCATTGCTGGAGCAGATAGCGAAGTTGGAGGAAGCTCTTTACAACATTCAGTTTGAACAACATTGGTTAGAGGCTCAGACCGACCGCCAAGCAATAGTGAATGATGCAATGAGCCGAAGAGCAGTACACAAGGCAATCTTTGAATCAGCAGCACTAATTGGGGCTAGTGCACTGCAAGTCTACCTTCTGCAGCGCTTGTTTGAACGGAAGCTGGGAACCTCTAGAGTTTAG 639 0.4444 MGFSLKHVLVFVLIGALLNLKGSEGIRFVIDREECFSHDVKYEGDTVHASFVVIKADSPWHYGDEGVDLVVKGPAGDQIQDFRDKTSEKFDFVAHKSGVHKFCFTNKSPYHETIDFDVHVGHFSYFEQHAKDEHFTPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNDAMSRRAVHKAIFESAALIGASALQVYLLQRLFERKLGTSRV. 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00071 212 Pfam emp24/gp25L/p24 family/GOLD 32 204 IPR009038 -
Seca8g00071 212 ProSiteProfiles GOLD domain profile. 33 120 IPR009038 -
Seca8g00071 212 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 9 207 IPR015720 -
Seca8g00071 212 SMART EMP24_GP25L_2 25 204 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00071 Seca-Chr8 896546 899253 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00071 - - gmx:100527418 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00071 8 896546 899253 Seca8g00071 8 896546 899253 ECH