Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00062 ATGGAAGGTGAAAGCATTGAATTACTTACTGCAGTTGAGGATAAACGTTATGGAGGAGTTAATCTAGACGTGGCCGTGGAGGACCCTATCGATTCTGCGCTCTTTCATTCTAAATTACAAGCTGAAATCTCAAAATGGAGGCAACAGGGAAAGAAAGGAATCTGGCTCAAGTTGCCAATACGACATTCAAATCTTGTTGATTCGGCAGTGAAGACTGGATTTAGGTACCACCATGCTGAGTCAGATTACTTGATGCTTGTATATTGGATCCCTGATACCCCTGATACCCTTCCTGCAAATGCTTCCCATCGCGTTGGTGTTGGTGCTTTTGTCATCAACAACAAGAGGGAGGTGCTTGTGGTTCAGGAAACCAATGGCAGATTTAGAGGCACAGGTGTATGGAAAATGCCTACAGGAGCTGTCAATGAAGGTGAGGATATTGGTAATGCTGCAATTAGAGAAGTCATGGAAGAGACAGCGCTTTGTCTCTTTGGTATCAGGCAAAGCCATAAATCTTTCTTCCAGAAATCAGATTTGTTCTTCGTTTGCATGTTGGAACCTCAATCCTTTGACATTAAGAGTCAGGCTTCAGAAATTGAGGCAGCTCAGGTACATGTTCTAAGGTCAATTGAAATGGATGTCACTAATTTTCAATTAAATAGCATTCTAAAGGTGCGCTTGATTTGTATTTTGTTTTTATTTTATAATGAGTGGATGCCAGTTGAAGATTATGCAGCCCAGTCTTTTGTGCAAGAAAATGAGCTCTTTGACTTTATTGCGAAAATATGCATATCAAAGTTGGATGGCAAGTACATTGGCTTTTCTAACGTACTTACCAGTACATCTTCTGGCAAAAAAACCTATCTGTACTTTAACAACCGGGATGCTAGCCACTTGTTAGCTTCCAACCATGAGCAGGCCTAG 924 0.4123 MEGESIELLTAVEDKRYGGVNLDVAVEDPIDSALFHSKLQAEISKWRQQGKKGIWLKLPIRHSNLVDSAVKTGFRYHHAESDYLMLVYWIPDTPDTLPANASHRVGVGAFVINNKREVLVVQETNGRFRGTGVWKMPTGAVNEGEDIGNAAIREVMEETALCLFGIRQSHKSFFQKSDLFFVCMLEPQSFDIKSQASEIEAAQVHVLRSIEMDVTNFQLNSILKVRLICILFLFYNEWMPVEDYAAQSFVQENELFDFIAKICISKLDGKYIGFSNVLTSTSSGKKTYLYFNNRDASHLLASNHEQA. 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00062 307 Pfam NUDIX domain 103 201 IPR000086 -
Seca8g00062 307 Gene3D - 7 95 - -
Seca8g00062 307 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 183 207 IPR003293 -
Seca8g00062 307 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 62 80 IPR003293 -
Seca8g00062 307 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 84 100 IPR003293 -
Seca8g00062 307 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 100 118 IPR003293 -
Seca8g00062 307 FunFam nudix hydrolase 2 6 95 - -
Seca8g00062 307 Pfam Nudix hydrolase domain 13 90 IPR040618 -
Seca8g00062 307 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 104 263 - -
Seca8g00062 307 ProSiteProfiles Nudix hydrolase domain profile. 102 227 IPR000086 -
Seca8g00062 307 SUPERFAMILY Nudix 70 236 IPR015797 -
Seca8g00062 307 PANTHER NUDIX HYDROLASE RELATED 4 296 IPR003293 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00062 Seca-Chr8 801926 806567 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00062 K26956 - gmx:100818821 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00062 8 801926 806567 Seca8g00062 8 801926 806567 ECH