Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g05090 ATGGCTAGAGAGGGCGAGGAAGAGAATGTGCCTGTGCTATCTTCGAGCACCAGCAGCAGAAGGAGAATCAGGAGAGGTACTGCAGGTGCCGATCCTCTGTTGTCAGTGTGTAGATGTTTTAGCTTCATTACCTCTTTCGCTGCCATTCTCTGCATCGTCGTCAACGTTCTCTCTGCAATCCGATCCTTCAAAAACGGATCCGATGTAAACATTTTCGATGGTATATTTCGGTGTTACGCCGTTTTCATAGCGTGTTTTGTGGTCCTGGCTGAGACGGAATGGAACTTCATCATCAAATTCTGGCAGGTTTTGGAGTATTGGGTAGGCAGAGGTATGCTGCAGATCTTTGTTGCAGTGATGACTAGGGCGTTCCCTGACTACACTGGGGAGCGAAAAGAGCTTGTTGTTCTTCAATACATAGCCTGCTATATGCTTCTTACTTGTGGCCTAATTTATGTTATTTCTGGAATCCTTTGCATTGGTTGTCTAAAACGTCATCGCCAGAAGCAGGAGATCACTAAAGAGCAAGCAGCCAAGGATCTTGAGGAGTTGGAACGGCGTAGAGAAGAACTTGAACAACTGCTTGTGACAGAATAG 597 0.4623 MAREGEEENVPVLSSSTSSRRRIRRGTAGADPLLSVCRCFSFITSFAAILCIVVNVLSAIRSFKNGSDVNIFDGIFRCYAVFIACFVVLAETEWNFIIKFWQVLEYWVGRGMLQIFVAVMTRAFPDYTGERKELVVLQYIACYMLLTCGLIYVISGILCIGCLKRHRQKQEITKEQAAKDLEELERRREELEQLLVTE. 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g05090 198 Coils Coil 167 198 - -
Seca6g05090 198 PANTHER OS07G0118300 PROTEIN 1 198 - -
Seca6g05090 198 Pfam COPI associated protein 43 158 IPR013714 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g05090 Seca-Chr6 118162885 118165328 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g05090 - - lja:Lj6g3v2193430.1 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g05090 6 118162885 118165328 Seca6g05090 6 118162885 118165328 ECH
Seca12g05123 12 139250270 139250952 Seca6g05090 6 118162885 118165328 PCT