Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g05062 ATGGGTAGTAAAAAACGGGACAACTCTTCTTCCGACGTGGAAACTAACACGAACGATTCTCAGAAACCCCTCAACAAGAAACCCAAAAATAATGATGGTTCCGCCGCGCCGTCTTCTACCAAGCCAATGGAAAGCAAGAAGAAAAGGAAAGCTTTCGACAAGGAGAGGCGCCGCGCCGCATCCGCAGCCGATGCCGGATCCCGAGCCGGAGCTTCGGAGCCGAAACCTGCGGCCCAGTCAGCGGATTCGCCCAGCACCAGCGGCGGTGCGCTTCCGGAGTTTCACATTGGGGTGTTCAAGGACTTGGCGGCGGCGGCTGAGTCGGTGCGGAAAGCCGCCGCGAAGCAAATGGTGATGGAGTTGAAGGAAGTTCAGAATGCTTACGATGGGCTTGAAGATAAGGAGATTGGTGATGGTGGCTTCAAGTTGGAAGCCGAGAAAGACGATGGATTGGACAACTGTGCACCCTCTGTCAGATATGCTGTTCGTAGGCTTATTCGTGGTGTCTCTTCATCTAGAGAGTGTGCACGACAAGGTTTTGCTTTAGGTTTGACAGTTTTAACTGGCGCTGTCCATAACGTCAGGGTTGAATCATTCCTTAAACTCGTAGTAGATTTATTAGAAGTAACTTCATCAATGAAGGGCCAGGAAGCAAAAGATTGTCTGTTGGGACGCTTATTTGCTTATGGTGCTTTGGCTCGATCAGGAAGACTTACACATGAATATAGTGTGGATAAAAACACTCCATACATAAAAGATTTTATCAGTGCACTTATCTCTCTTGCTAATAAAAAGCGGTACTTGCAAGAGCCTGCTGTCTCAATAATTTTAGACTTGGTTGAAAAGTTTCCTGTTGAAGCATTGGTGAATCATGTTATTGAAGCTCCTGGGCTCCAGGAGTGGTTTGAAGCTGCTATAGAAGTAGGAAATCCTGATGCTTTGCTCCTTGCTTTAAAAGTTAGAGAGAAGATTTCTATTGACAGCTCCAAATTTGGCAAACTCTTGCCAAATCCATTCAGCTCTGGCCAGCTATTCTCTGCTGATCACTTGTCCTCCCTGAGTAATTGCTTGAAGGAATCAACGTTCTGTCAGCCTCGTGTTCATAGTCTCTGGCCTGTTTTAATAAATATTCTTTTACCTAATACTGTTTTGCAATCAGAAGATGCTGTGTCAGCTTCAAATTCATTAAAAAAACACAAGAAGAGTAGAAAGTCTAGCTCTTCTGATGAAGAAACGGTGAAGAATCTTCAGTCTTTTTGTGAGATAATTATTGAAGGATCGCTTCTCTTCTCATCTCATGACCGTAAGCACTTAGCTTTTGATGTCTTGTTTCTTCTTCTCCAAAAGCTGTCTGCATCACTGGTTCCAGTTGTTCTGTCAAACAAAGTTGTTCAGTGCCTGATGGATATACTATCAACAAAGAACACGTGGCTGTATAAAGTTGCACAGCATTTTCTCAAACAGTTGTCGGATTGGGTGGGAGACGATGATGTCAGAAGAGTTGCTGTTATAGTGGCCTTACAGAAGCACGGCAATGGAAAATTTGAACGTATCACACGAACAAAACATGTTAAAGACTTCATGTCACAGTTCAAAACAGAACCTGGTTGCATGCTTTTTATTCAGAACTTGATGAACCTGTTTGTTGATGAAGGTAATGCCTCAGAGGAACCTTCAGACCAGAGTCAAACAACAGATGAAAATTCTGAAATAGGCTCTATTGAGGATAAGGATTCTCCTAGGATCAATGGGAATTCTGACTTTTTGAAGAGTTGGGTTATAGAATCCCTTCCTAGTATCTTGAAACACTTGAAGCTTGATCATGAAGAGAAGTTCCGAGTACAGAAGGAAATCATGAAATTTCTGGCTGTTCAGGGTCTGTTCACCGCATCGCTTGGCACTGAAGTGACTTCGTTTGAGTTACAGGAGAAATTCAGGTGGCCAAAATCTCCTACACCAAATGCTCTTTGCAAGATGTGTATTGACCAGCTGCAGTTGTTATTGGCAAATGCTCAGAAGGAAGAGGGCTCGCATCCTTTGGCTAATAGCCTTGACCCAAATGATCTCGGTTCATACTTCATGAAGTTCTTCAGCACCTTGCGCAACATTCCCTCAGTTTCTCTCTTTCGGTCTTTGGATGAGGAGGATGAAAAAGCTGTAAAAAATTTGCAAGCGATGGAGGCAAGATTATCCAGAGAGAATCAGGAAAGGAGCCATGACTGTAATGCTGATGCTCATAGATTGCATGCACTGAGATACTTGCTTATTCAGTTGCTCCTGCAAGTGCTTCTTCGTCCAGGGGAGTATTCAGAAGCTGCCTCTGAACTCATCATCTGTTGTAAGAAAGCTTTTTCTGCTTCTGATCTTCCTGAGTCCTCTGGAGAAGATGATTTGGATGATGAGGATGCTCCTGAATTGATGGATGTTCTTGTGGATACATTGCTCTCTCTGCTTCCACAGTCATCAGCCCCTATGCGAGTTTCTATTGATCAGGTGTTTAAATATTTTTGCAATGATATCACCGATGATGGTTTGATGCGGATGTTGCGGGTCATTAAGAAAAACTTAAAACCTGCAAGACATCCAGATACGGCAAGTGCAGATGAGGAAGACGACGAAGATGATGACTTTATCAATATTGAAGAAGAAGAAGAAATTGATCAAGCTGAGACAGGTGAGACAGGCGAGAGTGATGAGCAGACAGATGACTCTGAGTCTGTGCTTGAGGCAGAGGAAACTGATCATGGCCATCCTGAAGCTTCTGATGATTCTGATAGTGGGATGGATGACGATGCAATGTTCAGGATTGATACATATCTTGCCCAGATGTTCAAAGAGAAGAAAAATCAGGCAGGAGGTGAAACTGCTCATTCCCAGCTTGTGCTGTTCAAACTTCGCATCCTTTCATTGTTGGAAATTTTCCTTCATGAAAATCCAGGTCAGTATACATTGCTTATATCATTAATCAGAGGTAAGCCTCAGGTTCTTACAGTGTACTCAAAGTTGGCTCAGGCTTTTGTTAATCCACATACAGCAGAAGTTAGCGAGCAGCTTGGACAGCGTATATGGGGAATATTACAAAAGCAAATATTTAAAGCAAAGGATTATCCCAGGGGTGATGGGGTCCAATTATCCACTCTTGAATCTTTGTTGGATAGAAGTTTAAAATTAGCTTCAAAGCCATTTAAAAGACAGAAGTCCTCATCTAACTCATCAAAGCAATCAGCTGCTTGGAACCGACAGAAAATGGTTTCTTCCCTTGCCCAACAATCAACCTTCTGGATTTTGAAAATTATTGATTCAAGAAATTTCTCAGAGTCTGAGCTCCAGAGGATTGTTCAAATTTTTGAGAAAGTATTGCTGGGGTATTTTGATAGTAAGAAGTCTCAAATCAAATCTGGATTTTTAAAAGAAATATTTCGAAGACGACCATGGATTGGACATGCTGTGTTTGGATTCATTTTGGAAAGATGTGGAAGAGCCAAGTCAGACTTTCGAAGAGTGGAAGCACTTGATTTGATAATGGAAATATTGAAGTCACTAGTAACAGGGAGTAGTGATGATCAGAATGTATCGAAAAAGACTCTTAAAAACAATTTGGATAAACTCTCTCATCTAATGAAAGAATTGGTGACAAATATGCCGAGCAAACCAGCAAGGCGGACAGAGGTACAAAAGTTTTGTGTCAGGGCTTTTGAGATCTTGTCTAAGCTTAACCTCACCAAGTCTTTTGTTAAAACTCTGACACCTGATGCTCAAGCTGTCCTTGAAGCACAATTTGGTGAGCATTTCGTTAGTTTGAAGAAGCTGGAAAAATAA 3819 0.4229 MGSKKRDNSSSDVETNTNDSQKPLNKKPKNNDGSAAPSSTKPMESKKKRKAFDKERRRAASAADAGSRAGASEPKPAAQSADSPSTSGGALPEFHIGVFKDLAAAAESVRKAAAKQMVMELKEVQNAYDGLEDKEIGDGGFKLEAEKDDGLDNCAPSVRYAVRRLIRGVSSSRECARQGFALGLTVLTGAVHNVRVESFLKLVVDLLEVTSSMKGQEAKDCLLGRLFAYGALARSGRLTHEYSVDKNTPYIKDFISALISLANKKRYLQEPAVSIILDLVEKFPVEALVNHVIEAPGLQEWFEAAIEVGNPDALLLALKVREKISIDSSKFGKLLPNPFSSGQLFSADHLSSLSNCLKESTFCQPRVHSLWPVLINILLPNTVLQSEDAVSASNSLKKHKKSRKSSSSDEETVKNLQSFCEIIIEGSLLFSSHDRKHLAFDVLFLLLQKLSASLVPVVLSNKVVQCLMDILSTKNTWLYKVAQHFLKQLSDWVGDDDVRRVAVIVALQKHGNGKFERITRTKHVKDFMSQFKTEPGCMLFIQNLMNLFVDEGNASEEPSDQSQTTDENSEIGSIEDKDSPRINGNSDFLKSWVIESLPSILKHLKLDHEEKFRVQKEIMKFLAVQGLFTASLGTEVTSFELQEKFRWPKSPTPNALCKMCIDQLQLLLANAQKEEGSHPLANSLDPNDLGSYFMKFFSTLRNIPSVSLFRSLDEEDEKAVKNLQAMEARLSRENQERSHDCNADAHRLHALRYLLIQLLLQVLLRPGEYSEAASELIICCKKAFSASDLPESSGEDDLDDEDAPELMDVLVDTLLSLLPQSSAPMRVSIDQVFKYFCNDITDDGLMRMLRVIKKNLKPARHPDTASADEEDDEDDDFINIEEEEEIDQAETGETGESDEQTDDSESVLEAEETDHGHPEASDDSDSGMDDDAMFRIDTYLAQMFKEKKNQAGGETAHSQLVLFKLRILSLLEIFLHENPGQYTLLISLIRGKPQVLTVYSKLAQAFVNPHTAEVSEQLGQRIWGILQKQIFKAKDYPRGDGVQLSTLESLLDRSLKLASKPFKRQKSSSNSSKQSAAWNRQKMVSSLAQQSTFWILKIIDSRNFSESELQRIVQIFEKVLLGYFDSKKSQIKSGFLKEIFRRRPWIGHAVFGFILERCGRAKSDFRRVEALDLIMEILKSLVTGSSDDQNVSKKTLKNNLDKLSHLMKELVTNMPSKPARRTEVQKFCVRAFEILSKLNLTKSFVKTLTPDAQAVLEAQFGEHFVSLKKLEK. 1273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g05062 1272 MobiDBLite consensus disorder prediction 910 929 - -
Seca6g05062 1272 MobiDBLite consensus disorder prediction 553 582 - -
Seca6g05062 1272 MobiDBLite consensus disorder prediction 13 41 - -
Seca6g05062 1272 MobiDBLite consensus disorder prediction 555 569 - -
Seca6g05062 1272 Coils Coil 716 736 - -
Seca6g05062 1272 SUPERFAMILY ARM repeat 157 567 IPR016024 -
Seca6g05062 1272 Pfam DNA polymerase phi 160 975 IPR007015 GO:0003677|GO:0005730|GO:0006355|GO:0008134
Seca6g05062 1272 Coils Coil 1193 1213 - -
Seca6g05062 1272 PANTHER MYB-BINDING PROTEIN 1A FAMILY MEMBER 80 1269 IPR007015 GO:0003677|GO:0005730|GO:0006355|GO:0008134
Seca6g05062 1272 MobiDBLite consensus disorder prediction 883 929 - -
Seca6g05062 1272 Coils Coil 114 134 - -
Seca6g05062 1272 MobiDBLite consensus disorder prediction 1 89 - -
Seca6g05062 1272 MobiDBLite consensus disorder prediction 883 909 - -
Seca6g05062 1272 MobiDBLite consensus disorder prediction 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g05062 Seca-Chr6 117856746 117865221 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g05062 K02331 - gmx:100787296 1976.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g05062 6 117856746 117865221 Seca6g05062 6 117856746 117865221 ECH