Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g05057 ATGATTATGAAACAGTTATTGCGGAACACTGTGATACCCGAGGAACCCATGTTTAAACCTGAATATCCACCTCAAGAAATGGAACCTAGTGTTGTTGTCCTTGACGAAGATGGGAGACCGGAGGACCGAGTTGAGTCTGCCTTGAAGTGCCTTCCACATTATGATCCTGCTGAGTTCTTGGAAAATTCAGCTTCACCCTTTCGGTACTGGAAAATACGTGACTATGCTTATGCTTATCGATCTAGAAAAGTAACCCCATCTATGGTTGCTGAGCGCATCATCTCAATTATAGAAGAGAATGGAAGAAATAAACCTCCCGCGCCACTATTGATATCCTTTGATGCCGCAGAAGTCCGGAAGCAGGCAGCAGCATCTACTCAGAGGTTTGAAGCAGGGAATCCATTATCAATACTGGATGGTATTTTCATGGCCATCAAAGATGACATAGACTGCTATCCTCATCCATCTAAGGGTGGATCTACATGGATGCATGAGGTGCGCACTGTAAAGAAGGATGCTATCTGTGTTTCAAGATTGCGTAGCTGTGGTGTTATATTCATAGGGAAGGCCAATATGCATGAGTTTGGCATGGGTACAACAGGAAATAATCCTAATCATGGAACTACAAGAAATCCTCATGCACCAGATAGGTATACTGGTGGATCTTCTTCAGGTCCAGCTGCAATTGTTGCTTCTGGACTATGTTCTGCTGCCCTGGGAACTGATGGTGGAGGTTCAGTTCGTATTCCTTCTTCCCTTTGTGGTGTGGTGGGATTGAAGACAAATTATGGACGGACAAGCATGGAAGGGTCATTATGTGACTCTGGGACAGTGGAAATTATTGGACCCATTGCTTCAACGGTGGAGGATGTGATGCTAGTGTATGCAACACATTTCTCTTTTCCTATTTCAGTCTTCCCTTTTTATTAA 930 0.4398 MIMKQLLRNTVIPEEPMFKPEYPPQEMEPSVVVLDEDGRPEDRVESALKCLPHYDPAEFLENSASPFRYWKIRDYAYAYRSRKVTPSMVAERIISIIEENGRNKPPAPLLISFDAAEVRKQAAASTQRFEAGNPLSILDGIFMAIKDDIDCYPHPSKGGSTWMHEVRTVKKDAICVSRLRSCGVIFIGKANMHEFGMGTTGNNPNHGTTRNPHAPDRYTGGSSSGPAAIVASGLCSAALGTDGGGSVRIPSSLCGVVGLKTNYGRTSMEGSLCDSGTVEIIGPIASTVEDVMLVYATHFSFPISVFPFY. 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g05057 309 Gene3D Amidase signature (AS) domain 41 300 IPR036928 -
Seca6g05057 309 MobiDBLite consensus disorder prediction 199 222 - -
Seca6g05057 309 MobiDBLite consensus disorder prediction 199 218 - -
Seca6g05057 309 Pfam Amidase 112 296 IPR023631 -
Seca6g05057 309 SUPERFAMILY Amidase signature (AS) enzymes 67 299 IPR036928 -
Seca6g05057 309 PANTHER TRANSAMIDASE 62 296 IPR000120 GO:0003824
Seca6g05057 309 ProSitePatterns Amidases signature. 220 251 IPR020556 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g05057 Seca-Chr6 117799891 117809933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g05057 3 296 Acyl Lipid Metabolism Gene Families AT5G64440 71.525 1.14e-156 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g05057 - - gmx:100778732 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g05057 6 117799891 117809933 Seca6g05057 6 117799891 117809933 ECH