Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g05051 ATGGCAACCACCAGAGCCATAGCCATAGCCAGCAACTCCACCTGCACTCTCCTTACTAAGAAGCCCTTTTTGGGTTCCCATTCCCTTTGCCTCAAAAACCTCAAGGTTTCTAGGACTAGCAGGTCTTTCACCTGCAGGGCCATCTACAACCCCCAGGTTTCGGTCAAGGAGGAAGGCCAACCCCAAACCCTCGATTATAGAGCATTCTTCGTCGATCAATCTGGCAAGAAGGTTTCTCCCTGGCATGATATTCCATTGCAGTTAGGTGATGGTGTCTTCAACTTCATTGTTGAAATACCAAAAGAATCCAGTGCAAAGATGGAGGTTGCCACTGATGAGCCTTTCACCCCTATAAAGCAGGATACAAAAAAGGGGAAGCTTCGATTTTACCCCTATAATATACATTGGAACTATGGCTTACTTCCACAAACCTGGGAAGATCCATCTCTTGCAAATGCTGAAGTTGAAGGAGCATTTGGAGATAATGATCCAGTTGATGTGGTTGAGATTGGTGAAAGCCGGAGGAAAATAGGTGACGTTCTCAGGGTCAAACCCTTGGCTACATTAGCCATGATTGATGAAGGAGAACTTGATTGGAAAATAGTTGCAATTTCATTAGATGATCCAAAGGCTTCACTTGTGAATGATGTTGATGATGTTGAGAAGCATTTTCCAGTAAGCTCTATTACCTTACCAGCTGATGATTTATTTCCCAAGTCTTTTCTCTGCCATTTATTAGTTTACAATTATGTTGATAAACTATGGTGA 768 0.4297 MATTRAIAIASNSTCTLLTKKPFLGSHSLCLKNLKVSRTSRSFTCRAIYNPQVSVKEEGQPQTLDYRAFFVDQSGKKVSPWHDIPLQLGDGVFNFIVEIPKESSAKMEVATDEPFTPIKQDTKKGKLRFYPYNIHWNYGLLPQTWEDPSLANAEVEGAFGDNDPVDVVEIGESRRKIGDVLRVKPLATLAMIDEGELDWKIVAISLDDPKASLVNDVDDVEKHFPVSSITLPADDLFPKSFLCHLLVYNYVDKLW. 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g05051 255 ProSitePatterns Inorganic pyrophosphatase signature. 161 167 - -
Seca6g05051 255 PANTHER INORGANIC PYROPHOSPHATASE 60 223 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Seca6g05051 255 Pfam Inorganic pyrophosphatase 95 224 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Seca6g05051 255 SUPERFAMILY Inorganic pyrophosphatase 54 225 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Seca6g05051 255 Gene3D Inorganic pyrophosphatase 52 230 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g05051 Seca-Chr6 117761847 117765641 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g05051 K01507 - gmx:100787109 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g05051 6 117761847 117765641 Seca6g05051 6 117761847 117765641 ECH