Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g05047 ATGGCAGAAACTCGGTGTTTACCAATCATCGATGAAGAGGAAATAGACGATGACTTCTACGAGAAGATTGAAGCACCTAAGTTCGTGGACTTAACCGCACCTGATAAACGCCGCTCCGACGATGACCGCCACTGGTTCTGCTTGCGCGTTGGATGTGATCAAAAGCATGAGGAAGAGTTGGACTCTGAAGCAATTTACAAGAATTTTGTTCTTCGGGTTATGGCAGCTAGAAGTCCCAATGTGAGGCTCAGAAAAGCATTGAATAGAAGAGAAGCAAGTGGAAATTTGAAGTGCCCCCTTACAGCTCCTGCAAAACCAAGGGTGTCAAGAATGGCCTTCATTTCATCCTTGTCACACAAGATGACAGACAACAACGTGAAAGCTAAACCTAAACTTCTTTCTAAGGTTGCTGCAACACCAAATGCTAAGGTGAAGCAATCACCTTCTGTGGCCAAGGCTTTGACCACTCCAAGGAATCAGAAGAAGGTTTCTAATGTAGAACAATTTAGAAGTGTTCAGAGTAAGAAAGCAATGACTGTTGCTGTGCCTAAGAGCAGAGTGGTGGCGAAAGCCCTGGTTTTTCACTCACCAAAAAAGGTGGTAAAGATCAAGAGTTCTATGGAATTGAACACGGCCATGAAAACATTGTGTTCAGCAATGAAAAAGCTTGAACTCAATGGAGTAAAGAAGGATGGAGAAGGATGTAACAATTCAATGCCAGTGGCTGCATCCAGAAAGCAATTCAAGGGAAGAGAGGTTAAAAGTCGTGTGTTTGATTCATTGTATACTAATAATAATCGCAAGGAACCAGAAGCTAACACTGTGAGATGTTTGAAGGAGAAAAAAGTGAAAGGCATGCAGAAACGCCAGGTTACTGTGCCTAGTGAAAATGAGTCTAGTGACATGGAGATAGATGAAAAATCAAGGATTGACTCTCTAGAGAGATGGCCTGAATCAGGAACTTCTGAAGGTGGTAATGAAAAATCCCAACAACCAACAAAAGGAGAGAGTTCAGTTTCTGTTTTGTCAGAAGCTTCTAGAGATGATATTACTTCCAATGAAGAAGAGAAGGGAAAAGCTCATGAAGCCAGAAAGAGAAAAGCTGAAGAAAATCCAATGGCTTCTGATGATAAAGAAAATGAGATCGAACTCACAGAGAATGATGACAAGGAAAACGCTTCAGCTCCTAATGAGAACATAGTGATGAAAACCAATAACGACGACCCCAAAAAGGCTATTCTTGGCAACAAGCATGAGGATAGAAAAACACACAAGAAATCTACATCGAGTACCACAACTGGTTCTCAAGTTGTAAAATACAGAAAATTAAAGACCACAAATCCTAAGCCTTTTAAGCTGAGAACTGATGAAAGGGGAATTCTTAAAGAAGCAAACCTGGATAGGAAAATTCCCTCACCTCTGAAAGAAACCCCAGCTAAAGGTGGCAAGGCGGCGATAAGGAAACATCAAAATGTAAACAGAAAAAGTGAAACTTGTTCCACACATAGTGAACAAGACACTGATAATTATAGCAGCTGCGAAGAGAAACCAAACCAAGGAGACAACTCCAACAGCAAGGTCCAACATAAATTATCTGCCACACCTCATAGAAATCCTGGTCCTAAACTTCAGAAGCCCATTTATCAGGATGAAAATTTCAAAAGAAAATCTCAAATGATGCAACGTAAAGTTGTGAGGCCTCGAAGTGCTTTGTCAAGTAAGAAAGAAAAAGTGAAACTGAGTGTCATTATTGAAAAGCCGTCGGCCATTGTGAAGCCAAAGGAAGCAGCCAAACTACGTAAAAAAGACGTTTCTTCTCCTACAAGTAAAGCTGCTGGTTCCACTTCCAGGCCTTGTTCACGAGGGAGGGGGACTTTAACTGTTCCTAAGGAACCAAAGTTTCAGAATCTCCATGTGCCAAAGAGCTGCACCAGGAAACCGACTTAG 1947 0.416 MAETRCLPIIDEEEIDDDFYEKIEAPKFVDLTAPDKRRSDDDRHWFCLRVGCDQKHEEELDSEAIYKNFVLRVMAARSPNVRLRKALNRREASGNLKCPLTAPAKPRVSRMAFISSLSHKMTDNNVKAKPKLLSKVAATPNAKVKQSPSVAKALTTPRNQKKVSNVEQFRSVQSKKAMTVAVPKSRVVAKALVFHSPKKVVKIKSSMELNTAMKTLCSAMKKLELNGVKKDGEGCNNSMPVAASRKQFKGREVKSRVFDSLYTNNNRKEPEANTVRCLKEKKVKGMQKRQVTVPSENESSDMEIDEKSRIDSLERWPESGTSEGGNEKSQQPTKGESSVSVLSEASRDDITSNEEEKGKAHEARKRKAEENPMASDDKENEIELTENDDKENASAPNENIVMKTNNDDPKKAILGNKHEDRKTHKKSTSSTTTGSQVVKYRKLKTTNPKPFKLRTDERGILKEANLDRKIPSPLKETPAKGGKAAIRKHQNVNRKSETCSTHSEQDTDNYSSCEEKPNQGDNSNSKVQHKLSATPHRNPGPKLQKPIYQDENFKRKSQMMQRKVVRPRSALSSKKEKVKLSVIIEKPSAIVKPKEAAKLRKKDVSSPTSKAAGSTSRPCSRGRGTLTVPKEPKFQNLHVPKSCTRKPT. 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g05047 648 MobiDBLite consensus disorder prediction 272 287 - -
Seca6g05047 648 MobiDBLite consensus disorder prediction 348 393 - -
Seca6g05047 648 MobiDBLite consensus disorder prediction 449 474 - -
Seca6g05047 648 PANTHER NEUROFILAMENT HEAVY PROTEIN 3 646 - -
Seca6g05047 648 MobiDBLite consensus disorder prediction 410 427 - -
Seca6g05047 648 MobiDBLite consensus disorder prediction 503 532 - -
Seca6g05047 648 MobiDBLite consensus disorder prediction 607 622 - -
Seca6g05047 648 MobiDBLite consensus disorder prediction 322 347 - -
Seca6g05047 648 MobiDBLite consensus disorder prediction 595 648 - -
Seca6g05047 648 MobiDBLite consensus disorder prediction 428 442 - -
Seca6g05047 648 MobiDBLite consensus disorder prediction 272 577 - -
Seca6g05047 648 MobiDBLite consensus disorder prediction 300 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g05047 Seca-Chr6 117720234 117723678 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g05047 - - lja:Lj6g3v2171800.1 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g05047 6 117720234 117723678 Seca6g05047 6 117720234 117723678 ECH