Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04962 ATGTTGTCTCCGAAAGTTCTCCTCATATCCGTCGCCGTTATTTTCTCAGCGTTAGGGCTCAAGGCCTATCTTCCATTCATCACCTCCCACCTCCCTCTCCTCTGGAGCTTCTTCCTCCTCTGCTTTAAGCCTCCTTACCTCTACATCATCGTCAACGCCATCATCATCTCCATCGTTGCCTCCTCCAGGTTCCATCACTCCACCGCAGAAGAAGCCAATCACCATATGGACGACCAAACTCCTGAACCGCCCGTTCTGGAGGTGAAGGCGGTGCTGGTCAACGGTTCACCCGCGGTCGAAGAAGAAGAGAAAGAGAAGAGAGTAATTGACCTAGGAATAGTGCTGAGGAGGATGGACTCGCCGGAGATTCCACCGGAATATCTATCGCCGATGCAAAAACCTCTCGTTTCTGCTAGGTTCGCTCATCGGAAACCGCTTAAATCCAGTCCTGAAGTTATAGGCGGAAGAGCGTTGAGGGTGCAGGCGAAGCCGAAACGGCACGAGACGTTGGAGAACACGTGGAAGATGATAACGGAGGGTCGATCGATGCCGTTAAGCAGACACATGAAGAAGTGTGACACGTGGCAAAACCGCGGGGATATGGGCCCAGTGGAAGTGAACAAGTGTGAGAATCGGCCGCCACCTGCTGGGAAGCTGAGGAAAGAACCGTCGCTGAGTCAAGACGAGTTGAATCGCCGCGTGGAAGCGTTCATACAGAAATTCAACGAGCAGATGAGGTTGCAGAGACAAGAATCCTTGAATCATTACATGCAGATGATTAACCGGGGTACCACTTGA 798 0.5201 MLSPKVLLISVAVIFSALGLKAYLPFITSHLPLLWSFFLLCFKPPYLYIIVNAIIISIVASSRFHHSTAEEANHHMDDQTPEPPVLEVKAVLVNGSPAVEEEEKEKRVIDLGIVLRRMDSPEIPPEYLSPMQKPLVSARFAHRKPLKSSPEVIGGRALRVQAKPKRHETLENTWKMITEGRSMPLSRHMKKCDTWQNRGDMGPVEVNKCENRPPPAGKLRKEPSLSQDELNRRVEAFIQKFNEQMRLQRQESLNHYMQMINRGTT. 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04962 265 PANTHER COTTON FIBER (DUF761) 22 264 - -
Seca6g04962 265 Pfam Domain of unknown function (DUF4408) 32 64 IPR025520 -
Seca6g04962 265 Pfam Cotton fibre expressed protein 227 262 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04962 Seca-Chr6 117022526 117023959 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04962 - - vra:106775373 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04962 6 117022526 117023959 Seca6g04962 6 117022526 117023959 ECH