Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04933 ATGCAGTCAAGCTTACCACCAGCACTCTCATTTTCTGGAACATCAGGAATTATACTAGCAAATGATATAGCCAACCATGACCAGAATAATAATAGCTCTAAGGACAGTATTCCTTCGGGTGATGAAATTGCACTTCTCGAAACATCAAATTCTGCTACTTTAAACAAAAAAGAAGATGTGAACTTGCCTACACCAGAACAGAGACCACCACACATGGCGAATGTTCATATGCCAATGCCCTGGCCTTACAATGTACCTCCATATATGTATAATCTTCAAAATCCTATTCAGCAAATGCCTTCATACCAAGGATATCCTTTAACTAATATGCAGTCTTTTCCTCCTTACCTTCAAAGAAATATGCAATGGTCTTCTGACCTGGAAGTGAATCAGAAAACATCAGCAACCAAAAAGGAGAAATCTCATCACAAGAAAGGACCAGAAGAATATGATGACCAACAGACAGAGTCTAGTGATCCTGATTCTGGTATTGAATCTAATTCAGATGAACAGAAGGACTCAAATAATTCTTTGAAGGATGATCTGAAGAGGAAAAAGCACAGAAGAAAGTCATCTGGAACAGTTGTTATTCGTAATATCAACTACATCACTCCAAAAAGGAGAAATGGAAATGAGGGTGGAGTCTCTGATGAATCTTGTTCAGAAGATGATTTTATCATTGATGAAGAAACCATAAAAAAGAAGGTTGGCGTTGCACTTGAGTCATTGCAAAAGGTCCATAAAGTTGAAAAGCATGGTAATAGAAAAAAAACAGTGGCCCAGCGCAATGTAACTAAATCAAGTGATGCCACTGAGGAGGATCTCACTGAAAACTTGAGTGATGCATCTGAAGGAGGGACCAAAAATGAGAACTGGGATGCATTCCAGAACCTTTTGAAGATAGATGAAGAGACTGGAATTGATGGATCAGAAAGGATGCAATCAATTGATGTCCAGGATGAACATTTTGTGGTCAGAAACTCTGAAGAAATAATGCCAAATTCTGCTAGTTTCGCTCCAAACTTGGATTTCAAAGAAGTTCTGAAGAATCCTAAAGTTGCAAACGACTCCTTTATTGTGAATCAGAGAGATGGAGGAAATGAAAGTGGATCCAAGCTGGATGAATATGTGAACGGCTGTGGTCCAGTTACAAAGAGCAGGGATAATATGGGCGAAGAAATATTGTTATCACATAGATCAGGAGAACCTGTAAGTGAACTTGGTGATCCATTATCTACTTTTGTTGCTGATTCACAAGAAACCAAGCGCAGAACAGCAGAAGATTGGTTTGTTGTTGATAATTTGGAAAAGATGAGGAGCCCTGCTCCCCAAATTGTGCCTGCAGTGTTTGATGATGATTACACTCTATCATCAGTGAACGATTGCTCCCATGCTGAAAAAAGAGATGAAGGAACTCTCATTGATGATTCCTTCATGATACAGGGTCAATTGGTAGATAATAATCTTTCTGACTCACAATGGAAGACCGACATAAGTATGGTTGCAGATCTAACTTCTGCCAACAAGCTGGAAAGTGACACAACTGCTTCAAATGAAAAGCATGCATTAGCAAAGAACCAGGAAGCAAATGACCTGTGTGTGGTTCTGCAACGCGATTCTGGATTGGATTCTGTTGAGGCCTCATGGACAATGGACTATGAAATTGACTTTTCTTTCACGGAAACTGATAGAAGATTCTCTGTTGATGATGCACATAGTGTGAATAACAACCTCCCTGGTAGTCCTAAGAAAAGCAGCATGAATAAAAGCAAAGTTTCAGGAACAAGAAGTTCTGAAAAGGATGAAAAGTCAAAAGCTTTGCGTGGATCTGCCGGGAAGGGCAGGCCTGAGTTAATTTCTAGGAACAGAAAGTCATCTCTCCCAAGTAGGCCCATAGTTCAGAAGAGCAAAAGGGAACAGGAAGATGAAGTCAGGAAGAAGATGGAAGAAATGTTGGCTGAACGCCAGAGGAGAATTACTGAAAGAACTGCATCCTCTGGTGTTGCTCGAGTCCCCAAGAAGGACCAAATTGAAGGTAAAACAGCAAGGATTTCTACTAAAAGTGATAAGAATAAGACTCAATCAACAAACAGAATCAGTTCTGTCAAGGTCAGGGGAATTTAG 2124 0.3992 MQSSLPPALSFSGTSGIILANDIANHDQNNNSSKDSIPSGDEIALLETSNSATLNKKEDVNLPTPEQRPPHMANVHMPMPWPYNVPPYMYNLQNPIQQMPSYQGYPLTNMQSFPPYLQRNMQWSSDLEVNQKTSATKKEKSHHKKGPEEYDDQQTESSDPDSGIESNSDEQKDSNNSLKDDLKRKKHRRKSSGTVVIRNINYITPKRRNGNEGGVSDESCSEDDFIIDEETIKKKVGVALESLQKVHKVEKHGNRKKTVAQRNVTKSSDATEEDLTENLSDASEGGTKNENWDAFQNLLKIDEETGIDGSERMQSIDVQDEHFVVRNSEEIMPNSASFAPNLDFKEVLKNPKVANDSFIVNQRDGGNESGSKLDEYVNGCGPVTKSRDNMGEEILLSHRSGEPVSELGDPLSTFVADSQETKRRTAEDWFVVDNLEKMRSPAPQIVPAVFDDDYTLSSVNDCSHAEKRDEGTLIDDSFMIQGQLVDNNLSDSQWKTDISMVADLTSANKLESDTTASNEKHALAKNQEANDLCVVLQRDSGLDSVEASWTMDYEIDFSFTETDRRFSVDDAHSVNNNLPGSPKKSSMNKSKVSGTRSSEKDEKSKALRGSAGKGRPELISRNRKSSLPSRPIVQKSKREQEDEVRKKMEEMLAERQRRITERTASSGVARVPKKDQIEGKTARISTKSDKNKTQSTNRISSVKVRGI. 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04933 707 MobiDBLite consensus disorder prediction 673 687 - -
Seca6g04933 707 MobiDBLite consensus disorder prediction 571 593 - -
Seca6g04933 707 MobiDBLite consensus disorder prediction 594 610 - -
Seca6g04933 707 MobiDBLite consensus disorder prediction 132 152 - -
Seca6g04933 707 MobiDBLite consensus disorder prediction 571 707 - -
Seca6g04933 707 MobiDBLite consensus disorder prediction 253 290 - -
Seca6g04933 707 Coils Coil 634 657 - -
Seca6g04933 707 MobiDBLite consensus disorder prediction 688 707 - -
Seca6g04933 707 MobiDBLite consensus disorder prediction 128 199 - -
Seca6g04933 707 MobiDBLite consensus disorder prediction 165 181 - -
Seca6g04933 707 MobiDBLite consensus disorder prediction 634 661 - -
Seca6g04933 707 PANTHER COP1-INTERACTING PROTEIN-RELATED 48 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04933 Seca-Chr6 116696978 116700414 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04933 - - ccaj:109803488 1026.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04933 6 116696978 116700414 Seca6g04933 6 116696978 116700414 ECH