Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04918 ATGGCAGTGAGACTATCAGGGCATGAAGTATCCGATCTGTGTCTTGGGAAACCCGCGCTCAGGTCCCTTTCTGTCACCGACACCCTAGCAGACGCCCTCTCCGCCCTCAAGAGGATAGGCGAAACCCACCTCAGCGTCTGGAACTGCCACCACTCCCTCACCAATACCAACAACAACAAACTAGTTGAAGCCGAGAAGGAGGAGAAGGAGGAGAATTGCAATTGCAATTGCAATTGCAAATGCATCGCTAAGATTTGCATGGTCGATATCATCTGCTTCCTTTGCAAGCCACAAAACCTCTCTTCCCCCGCCGCCGCCCTCGCTTCCCCCATCTCCGTTCTCCTCCCTCCCGATAATTCCGCCCTCGTCCGCCACCTTCAACCCAATGCCAGCTTATTGGAGGCTATAGATGCTTTGTATGAAGGGGTGCATAACCTAGTGATACCCATAGATAAAGAGAGCAGGTCAAGGAAAAGGGACATTGAATCTTTGGAGTGGAGCACCTTGCATAACAACAAACGCACCTATTGTTGGCTCACCCAAGAGGACGTAATTAGGTACCTTCTTAACTCAATTGGTGTGTTTTCCCCCATACCTGGAAGCCCTATCAACACCCTTGGCGTCATTGACACGCAAAACCTCTTTGCTGTGTACTACGACGACCCTGCCTCCTCTGCTTTGGAGTTCCTCACTGCTTCCCTCATTCACCAATCCTCAATTGCCATTGTTGACCAACAAGGAAAGCTCGTTGGTGAAATCTCACCCTTCATGCTCAACTCTTGCGATGAGGCCGTTGCCCCTGCTATGGCCACTCTCTCCGCCGGTGACCTCATGGCCTACATCGACTACGGTGGGCCCCCTGAGGAGCTGGTGCAGCTGGTGAAGGAGAGGCTCGAAGAGCAGAATCTAGGGGCGGCTTTGGAGTTACTTGGCGATGAAATAACGGGGCTGCTTCCTTCTTGGTCATCGTTTTCTTCAACTTCTTCGTCTGATGAAGACTTATGCTCGTCCGGGGGAAAGAATTGGAAGCATGGCCATGGAGGGTACTCGGCAAGGGTGGGGAGGAGGTCAGAGGCCATTGTTTGCTATCCGTGGAGCTCTTTGGTGGCGGTGATGATTCAGGCACTTGCACATCGTGTCAGTTACGTGTGGGTTGTAGAACAGGATGGAACCTTGGCTGGGATTGTTACTTTCGAAGGCATGTTTAAGATTTTCAGAGAACAACTCAAATCAATGTGCTAA 1242 0.5137 MAVRLSGHEVSDLCLGKPALRSLSVTDTLADALSALKRIGETHLSVWNCHHSLTNTNNNKLVEAEKEEKEENCNCNCNCKCIAKICMVDIICFLCKPQNLSSPAAALASPISVLLPPDNSALVRHLQPNASLLEAIDALYEGVHNLVIPIDKESRSRKRDIESLEWSTLHNNKRTYCWLTQEDVIRYLLNSIGVFSPIPGSPINTLGVIDTQNLFAVYYDDPASSALEFLTASLIHQSSIAIVDQQGKLVGEISPFMLNSCDEAVAPAMATLSAGDLMAYIDYGGPPEELVQLVKERLEEQNLGAALELLGDEITGLLPSWSSFSSTSSSDEDLCSSGGKNWKHGHGGYSARVGRRSEAIVCYPWSSLVAVMIQALAHRVSYVWVVEQDGTLAGIVTFEGMFKIFREQLKSMC. 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04918 413 SUPERFAMILY CBS-domain pair 211 407 IPR046342 -
Seca6g04918 413 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 5 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04918 Seca-Chr6 116541530 116543414 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04918 - - lja:Lj6g3v2043210.1 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04918 6 116541530 116543414 Seca6g04918 6 116541530 116543414 ECH