Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04899 ATGGATTCGTCTTCTTCTCGGAATCCTCTCTTCGTCATCTCTCTCTTCTTCTTCTTCTGCAACTGGTCCTCTGTAGCCTTCAAGCCTTTAAATTCGGCTTTCGAAACTACCTACGTTCGTCTCTGCAACCATGTGGTCCCCGCATCTCCGGTTCAGCCAGATGCCGGACCCGCCCTCGGCGTCGCGGACTCGCTCCGGTTTCAATCCGGTTACTTCGACGGCGGTGATCGACTTTTCAACAGATCCACCGCCCTGAACTTCTCGAAGCACGTGTCGTTTCGCGCGACCTCCGTTCAGAGAAGCGCGAGCAAGGACGTGTATGAATTGCGAGGGCAAATGCTTCTTCGACAACGAGGAGGAGTGGACCCGATTCGGGGAAGGTTGCTCGGTAGGGTTTATTATCCGGGACGAAGGGTTTCACACTGGAGAGTATCGCAGTGGATGCGAATTTCTCTGAGCGGGTTTTGGTCACAGTCTTCTGGTAAGCTTTGTATGTTTGGAACTGGATCTTATGGTAATAATTTGCGAAATGCTAATGTTGTTCTTAAGCTTCGTTACCCTCGTGATATGACAATTTTGGATAGTTTGATTAGTGGGACTCTAGAAAGCTTTGATGACATGAATAACCTGCACTACTTTGAACCTATTTCTATATTGGCTTTGTCTCAGAGCTCAAATTACAAGTTTACAAAGGTTGGGAATGGCAATGAGAATAGTGGTTGTGTGGCTGGATCAGATGGGGAGAGTTTGTCTTTTAGAAACTTAAGCCAAGGTGCCTGCACTGTGTTTTTTGGACACATGGATAGATTTCAACTGGAATATGGGAGTCACTGTCATAATGTTAGTTGCAATCCTCTCGGGAATGATGTTGGGAAGTTGCCTGGTTTCATGCATTTTTATGGCACTCGATGCATGGAGAGGCAGAAGGTTCAGTTGCTGTTGGGTTTTCCTGACTCCAGTTACAGTGGTTTTCTGTTTCCATTTTATCCAAATGTGACCTTGTTATCTGAAGGGATATGGGATGAGAAGGAGAACCAGCTTTGTGCAGTCGCGTGCCGGATCTTGAACTTCACTGAATCTTGGGTTAATCCTTATGTTGGAGATTGCTCGATTAAACTCACATTAAGATTTCCTGCAGTTTTATCTTTAAGAAACAGGAGCACTGTTTTGGGCCATATTTGGAGTGACAAAGTGGTTGGAGAATCTGGTTACTTCAGTAAAATTGGATTTCAGGGTTCGTGGAAGGTATCAAGAGGCCTCCATGGTTTACAATACAAGTATACTGAGATTGAAAGAGTCAGAAAGTCTTGTGCAGAAAAGATGACTGCTAGAGGGAAGGGAAAGATGTATCCAGATGGACATTCTTCCGATGCAGCATTTAGCATGTTTGTGACAAACAGCAAAGGACAAGTAGCTCAAGGTTACTCATCACCACTATTTGTCGGTGATCAAAGTTATGATGGACAGTCTTATGGTGTTCCGGTTATCTCGACAATCGGAAAACTGAAAGCACACAATATTCAATACGGCAATGCATTGAATGTCAGCTATATGATGAGTTTTAATCCTCCTCCTGATTTCAATTTTGGTGGTGAGGACTCTTCAAAGGAAGTTAAAATTGGTGCTGAAGGATTGTACAATAGGAATACTGGACTTCTGTGTATGTTAGGATGTCGGCATTTGAGATCGCCTGACAAAATACTGATAAAGAATGAGTCTCTGGACTGTGAAATCATGATTAACATCCAGTTTCCTCCATTGAATGCAAAAGGAGGTGAATCTGTTAAAGGAACTATAGAAAGCACACGACATAAGTCAGACCCTTATTATTTTGATCCCCTTCAGTTGTCTTCATATTCTATTTACACAAGCCAAGCAGATGCATCCATTTGGAGAATGGATTTTGAGATAATCATGGTATTGATATCAAACACACTTGCTTGTGTGTTTGTTGGGTTGCAACTCCTCCATGTAAAAAAGAACCCAGATGTGCTTCCTCACATTTCCATTGTGATGCTTGTTGTTATTACTCTAGGTCACATGATTCCCCTGATGCTGAACTTTGAAGCCTTATTCAGGCCGAACCATAGTGTGCAGAATGCTTTTCTTGGGAGTGGAGGCTGGCTTGAAGTGAATGAAGTAGTTGTGAGGATGGTGACAATGATAGCCTTTCTTCTAGAGTTGCGTCTTGTACAGCTGACCTGGTCTTCAAGACAGGGCGAGGAAAGCCAGCCAGTCTTGTGGGTTTCTGAAAAAAGGGTTCTCTATATGACTCTGCCATTGTATATAGGTGGTGGATTGACTGCTTGGTTCGTGCACATATGGAAGAATTCTCACCAGAAAAGATTTAGACCATTCCGACTTTCACGCCACAGGTTTAAGATTCCCCGTAAACATTCTTACCAACCTCCTTCCCTCTGGGAAGACTTCAAATCTTATGCTGGTTTGCTCCTTGATGGTTTTCTGCTCCCTCAAATACTGTTTAACATATTCACTAACGCAGAAGGAAAGGCTCTGGCATCTTCCTTTTATGTTGGGACAACCATTGTTCGTATACTGCCCCATGCATATGATCTTTATAGAGCACACAGTTCTGCATGGTACCTTGATTTATCATATATATACGCAAACCATAGAATGGATTTTTATTCCCCGGCCTGGGACATCATAATCCCTTGTGGAGGACTTTTATTTGCTATCCTCATATACTTTAAGCAAAGATTTGGCAGCCGCTGCATTCTTCCAAAGAGGTTCAGAGAAATTTCTGCCTATGAGAAAGTACCTCCTATTGGTAATGACGATTTGTGA 2808 0.4316 MDSSSSRNPLFVISLFFFFCNWSSVAFKPLNSAFETTYVRLCNHVVPASPVQPDAGPALGVADSLRFQSGYFDGGDRLFNRSTALNFSKHVSFRATSVQRSASKDVYELRGQMLLRQRGGVDPIRGRLLGRVYYPGRRVSHWRVSQWMRISLSGFWSQSSGKLCMFGTGSYGNNLRNANVVLKLRYPRDMTILDSLISGTLESFDDMNNLHYFEPISILALSQSSNYKFTKVGNGNENSGCVAGSDGESLSFRNLSQGACTVFFGHMDRFQLEYGSHCHNVSCNPLGNDVGKLPGFMHFYGTRCMERQKVQLLLGFPDSSYSGFLFPFYPNVTLLSEGIWDEKENQLCAVACRILNFTESWVNPYVGDCSIKLTLRFPAVLSLRNRSTVLGHIWSDKVVGESGYFSKIGFQGSWKVSRGLHGLQYKYTEIERVRKSCAEKMTARGKGKMYPDGHSSDAAFSMFVTNSKGQVAQGYSSPLFVGDQSYDGQSYGVPVISTIGKLKAHNIQYGNALNVSYMMSFNPPPDFNFGGEDSSKEVKIGAEGLYNRNTGLLCMLGCRHLRSPDKILIKNESLDCEIMINIQFPPLNAKGGESVKGTIESTRHKSDPYYFDPLQLSSYSIYTSQADASIWRMDFEIIMVLISNTLACVFVGLQLLHVKKNPDVLPHISIVMLVVITLGHMIPLMLNFEALFRPNHSVQNAFLGSGGWLEVNEVVVRMVTMIAFLLELRLVQLTWSSRQGEESQPVLWVSEKRVLYMTLPLYIGGGLTAWFVHIWKNSHQKRFRPFRLSRHRFKIPRKHSYQPPSLWEDFKSYAGLLLDGFLLPQILFNIFTNAEGKALASSFYVGTTIVRILPHAYDLYRAHSSAWYLDLSYIYANHRMDFYSPAWDIIIPCGGLLFAILIYFKQRFGSRCILPKRFREISAYEKVPPIGNDDL. 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04899 935 Pfam Protein of unknown function (DUF2921) 41 914 IPR021319 -
Seca6g04899 935 PANTHER FAMILY PROTEIN, PUTATIVE (DUF2921)-RELATED 12 930 IPR021319 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04899 Seca-Chr6 116426268 116429075 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04899 - - aprc:113848765 1520.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04899 6 116426268 116429075 Seca6g04899 6 116426268 116429075 ECH