Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04442 ATGATTTACTACGGATTAGTTGTTGAAGGCCGACCCTGGGTGCATGTGAAAGCTAAAGTTAAGAAGGATTATCCATCAGTGCAGTACACATCATGGACGTTCTGGCCTGTTGTGGGGTGGATAAATCACAAATTCCTGCCTCTTCATTTTCGTGTTGTTTTCCACAGCTTAGTAGCATTTTGCTGTACAAGAAGAATTGCTGCCACAAAGAATGTGCCTAAGATCCAGTTAACCAAAATCTCCACTCCAAGGCTTCCCAGCAGAAGTTTGGTGGCAGAATTGGATTATCTAAATAATTACACTTTGGCTACCACCACAGCACATGTAAAAGAAGATCCTTACCACTCTGGTATCAACAATAACAATTCTACAGCACCTAGCAGAAATTCACCAAATTCCATGGAGGTTGTTAAGCTTCATTTGATTATGGAGATCGTAGCAGATAGAATGGAGCTGCACAAGAATGTTGGAATACAGCGTGATAATTGGAACCGTCTTCTATTGACATCAGTTAATATGATCACTCTCTCTGCTGCATCTATGGCTGGCCTTGCTGCTGTTGCTTCAAATGGAGCAGGAGCACCTCTTGTGGCATTGAAGGTTTCTTCCACAATTCTTTACATGGCAGCCACTGGCTTTCTTGTTCTCATGAACAAGATCCAACCATCTCAGCTTGCAGAGGAGCAGAGAAATGCTGCTAGATTGTTCAAGCAGCTTCATGGAGAACTCAGAACAAAGCTTTCTCTTGGGAATCCTACTGAAAATGATGTTTCTGAAGCAATGGAGAGAGTTTTAGCATTGGATAAGGCTTACCCACTTCCTCTTTTGGGCTCAATGCTAGAAAAATTCCCTCAAACTGTGGAACCAGCAGTTTGGTGGCCTCAATGGAAGCAAAGAGGTCAAAGACAAGAAGGATTAGGTGGGAAATTGAAAGGGAATAATGGATGGAATGCAAGGTTAGAAGAGGAAATGAAAAAGATTGTGATGATTTTGAAAAAGAAGGACATGGCAGATTACTTGAGGTTGAGTAAAGAAGTTTTAAACTTCAACAAGGTATTGGCAGTTTCTGGTCCAATACTCACTGGCCTTGCAGCTTTAGGTTGTGGTCTTTTGGGTTCTGTGAATGCATCTTGGCCTGTGATGCTTGGAGTTATTGGTGGTGCTTTAGCAAGTGTTGTTAACACCTTAGAGCATGGTGGGCAAGTAGGGATGGTGTTTGAGTTGTATAGAGGAACTACTGGCTTCTTCAAGCTAATGGAAGAGAGTATAGAACTAAATATAAATGAAGAAGATCCTGATAGAAGAGAAAATGGGGAATTGTTTGAAATCAAAGTTGCTTTACAACTAGGTAGGAGTCTCTCAGAACTAAGGCAATTTTCTGCTGCATATTCATCATCAGATGAAGAGAATGCTTGTGAAGAATTTGCTAGCAAGCTTTTCTAG 1443 0.413 MIYYGLVVEGRPWVHVKAKVKKDYPSVQYTSWTFWPVVGWINHKFLPLHFRVVFHSLVAFCCTRRIAATKNVPKIQLTKISTPRLPSRSLVAELDYLNNYTLATTTAHVKEDPYHSGINNNNSTAPSRNSPNSMEVVKLHLIMEIVADRMELHKNVGIQRDNWNRLLLTSVNMITLSAASMAGLAAVASNGAGAPLVALKVSSTILYMAATGFLVLMNKIQPSQLAEEQRNAARLFKQLHGELRTKLSLGNPTENDVSEAMERVLALDKAYPLPLLGSMLEKFPQTVEPAVWWPQWKQRGQRQEGLGGKLKGNNGWNARLEEEMKKIVMILKKKDMADYLRLSKEVLNFNKVLAVSGPILTGLAALGCGLLGSVNASWPVMLGVIGGALASVVNTLEHGGQVGMVFELYRGTTGFFKLMEESIELNINEEDPDRRENGELFEIKVALQLGRSLSELRQFSAAYSSSDEENACEEFASKLF. 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04442 480 PANTHER F-BOX PROTEIN WITH A DOMAIN PROTEIN 64 480 IPR027949 -
Seca6g04442 480 Pfam Petal formation-expressed 138 457 IPR027949 -
Seca6g04442 480 Pfam Mpv17 / PMP22 family 7 61 IPR007248 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04442 Seca-Chr6 111971128 111979101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04442 1 60 Miscellaneous Gene Families AT4G04470 66.667 4.74e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04442 - - gmx:100801646 638.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04442 6 111971128 111979101 Seca6g04442 6 111971128 111979101 ECH