Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04417 ATGGAAGATCAAAGAGGGAGTCTCCTTCCAATGAACAAGGAGAACCAAAATAGCTACTTAGGCCATGATGGAGCAGAATTTAGAAACTTCAGATCATACCTGAGATGGGTTTACGTGGATCAATCAAACCTATGCAAAGCTGGTCTATCTTGGTCTGTGTTCTTCACCTTGGCTTTTGTTGTACCCATTATGTCACACTTTCTACTCAATTGTCCCAACACCTGCGATGCTGATCACAGCCGACCATACCACATACCCGTGCAGATTTCTCTCTCTGTCTTTGCTACCCTTTCTTTCATTAGCCTCTCTCGTTGGGATCGTAAATATGGTTTGAGCAAGTTTCTTTTCCTTGATAAAGGAACCATGAAAGTCATCTTGCTTTGGGGACTTCCCTGTTTCATAGCTGAATGTGCCTACAAGATATGGTGGTATGTCTCAGGAACATCCCAAATACCATATTATGGTGAAATAAATGTGAGCAGCATCATTCTGGGCACATTGGAGCTATGTTCCTGGATTTATCGAACTTCCATTTTCTTCCTTGTGTGTGTCCTCTTTCGACTCATCTGCTACCTGCAAATACTCAGACTAGATGAGTTTGCTCCAGTTTTTCAGAGAGAAACTGAGGTGGGGACAATCTTGTTGGAGCATCTAAGAATAAGAAGGAATCTTCGGATCATTAGCCATCGTTTTAGAGCCTTCATTTTGTCTTCTCTGCTTCTGGTGACAGCAAGCCAACTCATTTTTCTGCTTATGGCTACAAAACCACATGCTGATGTTGATATCCTCAAGGCTGGAGAGCTTGCGTTAGTCTCTATCACACTGGTGAGTGGACTTTTCATTCTCTTGAGAAGTGCAACCAAGATCACACATAAAGCACAGTCCATCACAGGCCTTGCTGCTAAGTGGCATATATGTGCCACCATAAACTCATTTGACAACATTGATGGAGAGACACCAACAACACAGAGAGCTTCAGCCCAAGCTATGGCTGCTCATATTAGTTGGGGATCATCAGATGATGAGGTTGGAGATGAAGAGGATGATTTGGATAACACCAAAATGTTGCCAATTTACTCCCATACCATCTCATTCCATAAGAGGCAAGCTCTAGTGTCATACATGGAGAACAATAGAGCAGGAATCACAGTGTATGGATTCATGCTTGACAGAACTTGGCTCCACTCCATTTTTGCTATTCAATTGGCTCTCTGCCTTTGGCTACTCAACAAGACAGTTGGTCCAAAACAACACGGCACATTGACATGCAGCACCAGCAACAGGCATTTAATGCAGCACCCTCACATTCCAAAGTTCGGCAATTGGGACAGTGACAACGTTCCATACACAACATATTTTGAGAATGCACGCAGAGAAAAGGCTGAGTTTATGATGAATTCGGAAGATCCAAATCCAATGGAAAATCCAGAGGCCTTCAATACATGCATGACAGTTGGTGAAAATGTTGATGCTGATGAAATGAAGGCTTCTCATAGTCATACTTACTCCCGCACCGAAAGTTCTGTGGAAAAAGGAAGCCCTGAGGTATTACGAAACCAAAACCATAACAGGAGCAAGAGCTTCAGATCATACCTGAGATGGGTTTACGTGGATCAATCCAACCTATGCAAAGCTGGTCTCTCTTGGTCCCTATTCTTCTCCTTAGCCTTCGTTGTACCAATTGTATCACACTTCCTACTTGATTGTCCCACAACCTGTGATGCTGATCACAAACGACCATACCACATACCAGTGCAGATTTCTCTCTCTGTCTTTGCTACCCTCTCTTTCATCAGCCTCTCAAGATGGGATCGTAAATATGGTTTGAGCAAGTTCCTCTTCCTTGACAAAGTAAACGATGATAGCCTCAAGATTCAACACGGATATGCAGAACAGATGCAGGGGACCATGAAGCTCATTTTGCGTTGGGGACTTCCTTGTTTCATAGCTGAATGTGCCTACAAGATATGGTGGTACGTTTCAGGTGCATCCCAGATACCATATTATGGTGAAATATATGTTAGCAGCATCATTCTATGCATATTGGAGCTATGTTCTTGGATTTATCGAACCTCCATTTTCTTCCTTGTGTGTGTTCTCTTTCGACTCATCTGCTACCTGCAGATACTCAGATTAAATGAGTTTGCTTCAGTTTTTCAAAGAGAAACTGAGGTAAGGTCAATCTTGCTGGAGCACCTAAGAATAAGAAGGAATCTGAGGATCATCAGCCATCGTTTTAGAGGTTTCATTTTGGCTTCTCTGTTTTTGGTGACAGCAAGCCAGTTCAGTTTTCTGCTTATGGCTACAAAACCACATGCTGATGTTAATGTCCTTAAGGCTGGAGAGCTTGCGTTAGTCTCCATCACACTGTTGAGTGGACTTTTCATACTATTGAGAAGTGCAACCAAGATCACACATAAAGCACAATCCATCACAGGCCTTGCTGCTAAGTGGCATATATGTGCCACCATAAACTCGTTTGATAACATTGATGGAGAGACACAAACAACACAGGCACAGATAGTTTCAGCCCAAGATATTAGTTGGGGATTATCAGATGATGAGGTGGGAGATGAAGAGGATGAATTGGATAACACCAAATTGCTGCCAATTTACTCCCATACCATCTCATTCCATAAGAGGCAAGCTCTAGTGACATACATGGAGAACAATAGAGCAGGAATCTCAGTGTTTGGATTCATGCTTGACAGAACTTGGCTCCACTCCATTTGTGCTATTCAATTGGCTCTTTTCCTTTGGCTACTTAACAAGACAATTGGTATTTAG 2787 0.4263 MEDQRGSLLPMNKENQNSYLGHDGAEFRNFRSYLRWVYVDQSNLCKAGLSWSVFFTLAFVVPIMSHFLLNCPNTCDADHSRPYHIPVQISLSVFATLSFISLSRWDRKYGLSKFLFLDKGTMKVILLWGLPCFIAECAYKIWWYVSGTSQIPYYGEINVSSIILGTLELCSWIYRTSIFFLVCVLFRLICYLQILRLDEFAPVFQRETEVGTILLEHLRIRRNLRIISHRFRAFILSSLLLVTASQLIFLLMATKPHADVDILKAGELALVSITLVSGLFILLRSATKITHKAQSITGLAAKWHICATINSFDNIDGETPTTQRASAQAMAAHISWGSSDDEVGDEEDDLDNTKMLPIYSHTISFHKRQALVSYMENNRAGITVYGFMLDRTWLHSIFAIQLALCLWLLNKTVGPKQHGTLTCSTSNRHLMQHPHIPKFGNWDSDNVPYTTYFENARREKAEFMMNSEDPNPMENPEAFNTCMTVGENVDADEMKASHSHTYSRTESSVEKGSPEVLRNQNHNRSKSFRSYLRWVYVDQSNLCKAGLSWSLFFSLAFVVPIVSHFLLDCPTTCDADHKRPYHIPVQISLSVFATLSFISLSRWDRKYGLSKFLFLDKVNDDSLKIQHGYAEQMQGTMKLILRWGLPCFIAECAYKIWWYVSGASQIPYYGEIYVSSIILCILELCSWIYRTSIFFLVCVLFRLICYLQILRLNEFASVFQRETEVRSILLEHLRIRRNLRIISHRFRGFILASLFLVTASQFSFLLMATKPHADVNVLKAGELALVSITLLSGLFILLRSATKITHKAQSITGLAAKWHICATINSFDNIDGETQTTQAQIVSAQDISWGLSDDEVGDEEDELDNTKLLPIYSHTISFHKRQALVTYMENNRAGISVFGFMLDRTWLHSICAIQLALFLWLLNKTIGI. 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04417 928 PANTHER RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K 502 927 IPR021924 -
Seca6g04417 928 Pfam Protein of unknown function (DUF3537) 26 400 IPR021924 -
Seca6g04417 928 Pfam Protein of unknown function (DUF3537) 526 912 IPR021924 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04417 Seca-Chr6 111717615 111726560 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04417 - - gmx:100809035 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04417 6 111717615 111726560 Seca6g04417 6 111717615 111726560 ECH