Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04364 ATGTCTGCTGAAGAGGCTGCTCCTGTTTTTGTGTCATGGGAGGAGCAAGTGATATGCCAGGAACGTGGGAGCCGTGTGATTCATTTCTACTTGAAGGATGCGTCGGGGAATTCGGTGCTTGCTGTTGTGGGGACTGAGAGGAGTGTGAGGCACATGATGTATGTTATCCCTGATCATTTTTTGCGGGCTTATGGATCCACACAGTCCATCAATGCATGTAAATGGAGGGCAAGGAGAGAGGTCGTCGACTGGCTCACTTGTTTGGTTTCACGGAATCGTCCCAACAATGCAGGTGCACAGCTGGATGATTCGGCACAAGCTGTAGAATCTCTCAAGATATTAACAGCTGGAATTGATGTTAACAAAAAATGTTTACCTGATAAAATGATTTCTAGGAAATTGAAATTTCAAAGTTCAGATATCGAATGGTCAGGCATTTCTTGGTTTTGTGCTAAACAGCTGAAGCACTACCCAGGGTTTAGCAGGAATGGCACAACCATATATGTTCATTCATTTGTATATATTATGGCTGAAGAGGAAAACCACTATCTTGGTTACCTGGAAGATATGTATGAAGACAAAAAGAAACAAAAAAAGGTCAAGGTACGTTGGTTTCACCATGGTCAGGAAGTTAAGCATGTGATCCCACAGCTGAGTCTGCAAGAGGGAGAGGTTTTCATCACACCTCATGTTCAGGTGATCAGTGCTGAGTGTGTCAATGGTCCTGCAACAGTTTTGACTCCTAAGCATTATGAGATGTACCTGGCTGCTGTGCCCCATACCTCTTTATCTGAGATCCATACATGCTCTAGGCAGTTTAAAAATAATAAGCTTAAGCCTTTCACACTTACTAAGTTGCGTGGATACAGTAACCAATCTGTACTTTCTTGTTTGGATAGTCCTAATCTCTCCAAGAGAAAGGCTAAGTGTCAAAAATTGCACGTAGAAGATGATGAGAACTTAGCTCAAGATGATCCTTTAAGGTCCACCAATAAGAGGAATAGAAGTTCCATGGGGCATCAAGTACTTGAAAAGGGTTCTTCTGGTCTGCAAAACTCTGCTCCTGTAAATGAGATGACAAAATGTGAACCGAAATTCCCGAGTTTGAAATTAAAACTATCAAGAAAAACAATGGGTATCAAGGTTATTGAACCTAAGCCTCAACTGTCTTTTAAGGTTGATGAAAAGATTGAGGTGCTCTGTCAAGACAGTGGCATTAGAGGATGCTGGTTTAGATGTAAAGTCTTGAATGCGTCTCAGAGGATGCTGAAGGTCCAATATGATGATCTGCTGGATGTAGATGAAATAGAGAAACTAGAGGAATGGGTCCCTGCATCTAGAGTGGCAGCTCCTGACAAACTGGGTATGAGATGTTCAGGCCGCTTAACAGTACGACCATTCCCTCCTGAACATACTAAAAGTCATACTTTTGAGATTGGAGCACCAGTGGATGCCTGGTGGAGTGATGGATGGTGGGAAGGTGTCATAACTGCAGTCAATGATTGTGGAGATGGAATCCTGCAGGTTTATACCCCTGGTAGGATCTAA 1548 0.4283 MSAEEAAPVFVSWEEQVICQERGSRVIHFYLKDASGNSVLAVVGTERSVRHMMYVIPDHFLRAYGSTQSINACKWRARREVVDWLTCLVSRNRPNNAGAQLDDSAQAVESLKILTAGIDVNKKCLPDKMISRKLKFQSSDIEWSGISWFCAKQLKHYPGFSRNGTTIYVHSFVYIMAEEENHYLGYLEDMYEDKKKQKKVKVRWFHHGQEVKHVIPQLSLQEGEVFITPHVQVISAECVNGPATVLTPKHYEMYLAAVPHTSLSEIHTCSRQFKNNKLKPFTLTKLRGYSNQSVLSCLDSPNLSKRKAKCQKLHVEDDENLAQDDPLRSTNKRNRSSMGHQVLEKGSSGLQNSAPVNEMTKCEPKFPSLKLKLSRKTMGIKVIEPKPQLSFKVDEKIEVLCQDSGIRGCWFRCKVLNASQRMLKVQYDDLLDVDEIEKLEEWVPASRVAAPDKLGMRCSGRLTVRPFPPEHTKSHTFEIGAPVDAWWSDGWWEGVITAVNDCGDGILQVYTPGRI. 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04364 515 Gene3D - 132 312 IPR043151 -
Seca6g04364 515 Pfam Agenet domain 395 469 IPR008395 -
Seca6g04364 515 MobiDBLite consensus disorder prediction 319 355 - -
Seca6g04364 515 CDD Tudor_Agenet_AtDUF_rpt1_3 391 469 - -
Seca6g04364 515 SMART BAH_4 165 284 IPR001025 GO:0003682
Seca6g04364 515 MobiDBLite consensus disorder prediction 332 355 - -
Seca6g04364 515 Pfam BAH domain 166 277 IPR001025 GO:0003682
Seca6g04364 515 ProSiteProfiles BAH domain profile. 165 284 IPR001025 GO:0003682
Seca6g04364 515 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 388 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04364 Seca-Chr6 111227250 111234950 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04364 - - gmx:100816046 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04364 6 111227250 111234950 Seca6g04364 6 111227250 111234950 ECH