Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04310 ATGAGGCGAGGAGAGCTTGCTCTGAATAACATGTGGACGTCAAATGTTGTAGTGTTTTTGGTTAACCTTGGACTAGGAGAAGACACCAAACCAACGTTGGCCATGGCTGCAGCCTCCATCATCCCTTTGTTCCACACCAGAATCAGAATGTTTTGTCCCTTGCAACTCAATTCTCCATTTTCTACATCAAATCAGAGATGGAGGTGGAGACATTCTATGTTAGTGAATGCAAAACCTGTTCTCAAAGATGGCACTCTCAGTGTTAATGGCAAGGATGCATTAACGGGTGTGCCTGAAAATGTGGTCTTGACACCATTGACTGCTTCATCCGCTTTCATAGGAGCCACTGCTACTGATGCTAGTTCACGCCTTGTCTTCAAACTTGGACTCATCCAGGATGTCAGATTACTATGCCTATACAGATTTAAGATTTGGTGGATGATACCTCGAGTGGGGAAGTCAGGGAGGGACATTCCTATTGAAACTCAGATGTTGCTCTTGGAAGCAAGAGAAGGAACTGATTCTCAATCATCCAAGGGAGATATTTCTTATATAATTTTCTTGCCAGTTCTAGATGGTGAATTTAGAAGCAGCTTGCAAGGAAATTCATCTAATGAACTTGAGCTTTGTGTTGAAAGTGGAGACCCAGCAGTAGTTACTTCTCAGTCCTTAAATGCTGTTTTCATGAATTATGGAGACCATCCATTTGATCTAGTGAAGGAATCCATGAAGGTTTTGTCAAAGCACAGTGGTAGCTTTTCACTGAGGGAAACCAAACAGGCTAGTCAGCTGAACCTTTAA 801 0.4257 MRRGELALNNMWTSNVVVFLVNLGLGEDTKPTLAMAAASIIPLFHTRIRMFCPLQLNSPFSTSNQRWRWRHSMLVNAKPVLKDGTLSVNGKDALTGVPENVVLTPLTASSAFIGATATDASSRLVFKLGLIQDVRLLCLYRFKIWWMIPRVGKSGRDIPIETQMLLLEAREGTDSQSSKGDISYIIFLPVLDGEFRSSLQGNSSNELELCVESGDPAVVTSQSLNAVFMNYGDHPFDLVKESMKVLSKHSGSFSLRETKQASQLNL. 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04310 266 PANTHER - 80 262 IPR008811 -
Seca6g04310 266 Pfam Raffinose synthase or seed imbibition protein Sip1 82 262 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04310 Seca-Chr6 110824489 110826239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04310 73 260 Glycoside Hydrolase AT3G57520 41.146 7.52e-54 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04310 - - gmx:100819413 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04310 6 110824489 110826239 Seca6g04310 6 110824489 110826239 ECH