Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04129 ATGGATATTGGAGGAAATGGGATTTTCCCAGATGAGGTGGTTATTCAGATTCTGGCAAGGTTGCCTGTGAAATCCCTTTTTAGGAGCAAAACCGTGTGCAAACTGTGGTATAGGTTGTCCATGGATAAGTATTTCATTCAACTCTACAATGAGGTGTCTAGGAAGAACCCTATGATTCTGGTGGAGATTTCAGATTCATCAGAGTCCAAATCTAGCTTAATTTGTGTTGATAATTTGAGGGGTGTCTCTGAAATTTCACTCAACTTCTTGAATGATAGAGTTAAGGTTCGAGCATCTTGTAATGGCTTGCTGTGTTGCTCTAGTATTCCTGATAAGGGTGTCTTCTATGTTTGCAATCCTGTAACTCGTGAGTTCAGGTTGCTTCCTAAGAGTAGGGAAAGGCCTGTGACTCGGTTTTATCCGGATGGTGAAGCTACCTTGGTTGGCTTGGCCTGTGATTCATCATATCAGAAGTTCAATGTTGTTCTAGCAGGTTGCCACCGCACCTTTGGTCATAGGCCAGATGGAAGTTTCATATGTTTGGTGTTTGATTCAGAGTTGAACAAGTGGAGGAAGTTCATTTCTTTCCAAGATGACCATTTTACTCATATGAATAAAAACCAAGTTGTTTTTGTCAATAATGCTTTGCACTGGTTGACTGTTAGCTCTACTTATATACTTGTACTTGATTTAAGTTGTGACATTTGGAGGAAGATGCCATTACCTTATGACTTGATTTATGGAATGGGAAATAGAATTTATCTGTTAGACTTCGATGGATGTCTGTCTGTTATTCAAATTTCAGAAGCATGGATGAACATATGGGTGCTAAAAGATTACTGGAAAGGTGAATGGTGTATGGTGGATAAGGTGAGTCTGAGGTGTATCAGAGGAATGGTACCAGGCATTTTTCCAATCAGTCAAACAGGTGAATATGTTTTTTTGGCAACTCATAAGCAGGTTTTGGTGTATCATCGTAAGACCCAAGTTTGGAAGGAAATGTATTCTGTGAAGTATAGCTCAGCACTCCCATTATGGTTTTCAGCACATGCATATCGCAGCACAATGTTCTCGTGTAACTGA 1083 0.3989 MDIGGNGIFPDEVVIQILARLPVKSLFRSKTVCKLWYRLSMDKYFIQLYNEVSRKNPMILVEISDSSESKSSLICVDNLRGVSEISLNFLNDRVKVRASCNGLLCCSSIPDKGVFYVCNPVTREFRLLPKSRERPVTRFYPDGEATLVGLACDSSYQKFNVVLAGCHRTFGHRPDGSFICLVFDSELNKWRKFISFQDDHFTHMNKNQVVFVNNALHWLTVSSTYILVLDLSCDIWRKMPLPYDLIYGMGNRIYLLDFDGCLSVIQISEAWMNIWVLKDYWKGEWCMVDKVSLRCIRGMVPGIFPISQTGEYVFLATHKQVLVYHRKTQVWKEMYSVKYSSALPLWFSAHAYRSTMFSCN. 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04129 360 Pfam F-box-like 10 43 IPR001810 GO:0005515
Seca6g04129 360 ProSiteProfiles F-box domain profile. 9 52 IPR001810 GO:0005515
Seca6g04129 360 CDD F-box_AtFBW1-like 9 45 - -
Seca6g04129 360 NCBIfam F-box protein interaction domain 99 325 IPR017451 -
Seca6g04129 360 PANTHER BNACNNG10540D PROTEIN 9 338 - -
Seca6g04129 360 SMART fbox_2 9 49 IPR001810 GO:0005515
Seca6g04129 360 Gene3D - 9 44 - -
Seca6g04129 360 SUPERFAMILY F-box domain 9 88 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04129 Seca-Chr6 108953536 108954618 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04129 - - gmx:100811223 694.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04129 6 108953536 108954618 Seca6g04129 6 108953536 108954618 ECH