Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04128 ATGGCTCGGAAGGGTAATCAACAGAAGAATGGACTGAACCACAGAAAAGGGGTTTCTGGGGGTGTCCTTCCGGGTATGAAAGGTCATGCTAAAGGAGGACAGGCAAAGGTTTTTCCGGGAGAGGAACTTGTGAATGGCAACCGGCCAAGTGGTCTTTCACAGAATCCTTGTGAAGCTGGGTCTGCTGCTGATGGCAATAGTAATGAGCAAAAATATGAAAAGTTTTCTAGGAAAGAAAAACAAGGGATGGATGCAAAGCATGACCTGGAGGAATCATTGTCCTTTGGGAGCAGTTCAGGGAATGGCAGTCTGAATTCTGAAGTTCCAATACAGGAAGAGAATGGGACTTTACCAAGGAGTAATCAAGATCAACAGAGTATCAAGAGTAGATTGAGCCATTTACTGGAAAGTTTGCACATTCAAAGTGTGGTAGAAAATGTAGAGCTTTCTGATAATGTGGTTATTAAGAGATTAAGGCTGTCTATGTTGACCATTTTTACAACAGTTACTGAGTGGATAACCAGGCAGAAGCCATTGTTTGTATCTCTTAGAGCCAGCATTTCAAAAGCTTGTGAAAATCTCAGAACAAAATTTCAGCAGGGATATCCTGTTGTTCTGAAGTGGCTCATGCATTTTGGGAACATAATGCTCCTATTATCAGTGTTTTGGTTGGACTGTGCCTTTCGGGGTATTGATTCATTTGTACGAATGGGTACAACATCCTTCTTCTCTGTTATATGGTGCAGCATATTCTCGGTGATTAGTATGGTAGGGATGCTCAAGTTTCTTCTAATCCTGGGCCTGGCTGCCTTGATTGGATTTTTTGTTGGGCTCATGCTTGCAATTTTGGTAGTTGCAGTCCTTGGAGTTGTTACCTTGTGGTTTTATGGTAGCTTTTGGACAACAGCATTTTTCATCATCCTTGGAGGATTGGCATTTATGTTAAGTCATGAACGTGTAGCACTACTTATTACCACTATGTATTCTGTCTACTGTGCTTGGCTGTATGTTGGGTGGCTTCGTCTGCTATTGGCTTTTAATTTAGCTTTTATCTCAAGTGATATTCTGATATACTTCCTCAAGAAAAACATAGATCAACAGAGTAGATCCAACCCTTTTGAGCAAAGGGCTGGAATGCAAGGCCAGCCAGGTTTCGTAAATGATGAACCAATGCAGGCTTCTTCCTCTGAACATGGACCAGGGCCATCTGCAGATCGTAATACTGGAGTCCCTTCAACTAGCGGGGTTGATTCTGATATAACTTCTGAAGATGAAATTGTTCGGTTGTTGAATTGCTCTGATCACTATTCAGCACTGGGCTTGACGCGCTATCAAAATATAGATGTTTCAGTACTGAAGCGGGAATATAGAAAGAAGGCAATGTTGGTACATCCTGATAAAAATATGGGCAATGAAAAGGCCGCAGAAGCCTTTAAGAAACTTCAAAATGCATATGAGATTCTAATGGATTCCTTGAAGCGAAAAGCTTATGATGATGAGCTAAGGAGAGAAGAGCTTTTGAATGTATTTCGTAGATTTCATAATGCTTCTCATAAGAGTGGTAGGCATGGATTCTTTCCTTCTGGACTTGAACGGTCAGATGCAGATGGTGAGGACCCATTTGGTGATTCAAGGCGAATAGCTTGTAAAAGGTGTGGTGGATTTCATGTCTGGATACACACCAAGAAACAAAAGTCTCGGGCAAGATGGTGCCAGGATTGTCAAGATTACCATCAAGCCAAGGACGGTGATGGATGGGTTGAACAGTCTTCCCAACCATTTCTTTTTGGCTTATTGCAGAAGGTAGATGCTCCTTCTGCTTATGTGTGTGTCGACAGCAGAATATATAATGCCACTGAATGGTATATCTGTCAGGGTATGAGATGTCCAGCGAATACTCATAAGCCAAGTTTTCATGTGAACACCAGTTTAATGTCCAAGCATAATTCTGGCAAAGGAACTAGTTCAGGCCAAAGAGGTGGGCGGATGCCATCACCTAATATGGAAGAAACCATGACGGAGGAAGAGTTCTTCGAGTGGTTACAGAATGCAGTACATGCAGGCGCATTCGACAGTTTTAGTGGCAGCACTGAAACAGAGAGTCCATCTGCCAAATCTGGAAATGGGATGAAAAATCCTGGCAGTGGAAGTGGAAGTGGCAGTGGCAGCGGCACTGCCAGCGGCACTGGTAGTGGCAGCAGGAGAAAGAAAAAGGGAAAGAAGCAGTGGTGA 2232 0.4297 MARKGNQQKNGLNHRKGVSGGVLPGMKGHAKGGQAKVFPGEELVNGNRPSGLSQNPCEAGSAADGNSNEQKYEKFSRKEKQGMDAKHDLEESLSFGSSSGNGSLNSEVPIQEENGTLPRSNQDQQSIKSRLSHLLESLHIQSVVENVELSDNVVIKRLRLSMLTIFTTVTEWITRQKPLFVSLRASISKACENLRTKFQQGYPVVLKWLMHFGNIMLLLSVFWLDCAFRGIDSFVRMGTTSFFSVIWCSIFSVISMVGMLKFLLILGLAALIGFFVGLMLAILVVAVLGVVTLWFYGSFWTTAFFIILGGLAFMLSHERVALLITTMYSVYCAWLYVGWLRLLLAFNLAFISSDILIYFLKKNIDQQSRSNPFEQRAGMQGQPGFVNDEPMQASSSEHGPGPSADRNTGVPSTSGVDSDITSEDEIVRLLNCSDHYSALGLTRYQNIDVSVLKREYRKKAMLVHPDKNMGNEKAAEAFKKLQNAYEILMDSLKRKAYDDELRREELLNVFRRFHNASHKSGRHGFFPSGLERSDADGEDPFGDSRRIACKRCGGFHVWIHTKKQKSRARWCQDCQDYHQAKDGDGWVEQSSQPFLFGLLQKVDAPSAYVCVDSRIYNATEWYICQGMRCPANTHKPSFHVNTSLMSKHNSGKGTSSGQRGGRMPSPNMEETMTEEEFFEWLQNAVHAGAFDSFSGSTETESPSAKSGNGMKNPGSGSGSGSGSGTASGTGSGSRRKKKGKKQW. 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04128 743 MobiDBLite consensus disorder prediction 691 743 - -
Seca6g04128 743 Pfam DnaJ domain 434 498 IPR001623 -
Seca6g04128 743 MobiDBLite consensus disorder prediction 384 418 - -
Seca6g04128 743 MobiDBLite consensus disorder prediction 1 123 - -
Seca6g04128 743 MobiDBLite consensus disorder prediction 387 418 - -
Seca6g04128 743 MobiDBLite consensus disorder prediction 70 91 - -
Seca6g04128 743 Pfam Cleavage inducing molecular chaperone 544 641 IPR032843 -
Seca6g04128 743 ProSitePatterns Nt-dnaJ domain signature. 478 497 IPR018253 -
Seca6g04128 743 MobiDBLite consensus disorder prediction 47 69 - -
Seca6g04128 743 PRINTS DnaJ domain signature 456 471 IPR001623 -
Seca6g04128 743 PRINTS DnaJ domain signature 473 493 IPR001623 -
Seca6g04128 743 SUPERFAMILY Chaperone J-domain 429 504 IPR036869 -
Seca6g04128 743 CDD DnaJ 434 490 IPR001623 -
Seca6g04128 743 PANTHER OS03G0832900 PROTEIN 1 743 - -
Seca6g04128 743 Gene3D DnaJ domain 424 516 IPR036869 -
Seca6g04128 743 MobiDBLite consensus disorder prediction 691 732 - -
Seca6g04128 743 MobiDBLite consensus disorder prediction 641 662 - -
Seca6g04128 743 ProSiteProfiles dnaJ domain profile. 434 501 IPR001623 -
Seca6g04128 743 MobiDBLite consensus disorder prediction 641 672 - -
Seca6g04128 743 MobiDBLite consensus disorder prediction 92 123 - -
Seca6g04128 743 SMART dnaj_3 433 493 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04128 Seca-Chr6 108943310 108949538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04128 1 692 Miscellaneous Gene Families AT5G49580 53.276 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04128 K09534 - gmx:100812282 1124.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04128 6 108943310 108949538 Seca6g04128 6 108943310 108949538 ECH