Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04094 ATGAATGTTGTTAGTAATGCCTTCCGAACAGAATTTGATCCAGAGGACTGTCCAGCAGACTGTACACGGCCTTGTGAAAATGTTTGCCCTGCTAATGCAATATCATTCCAAGGGAAATCTACTTTAGGAATTTCATATAACACTGAAGCACCAAGAGTACTAAAGGATGGTGTCATTACAGAACGCTGCTATGGTTGTGGTCGCTGTCTTCCAGTTTGCCCCTATGATAAAATAAGAGAGGTAACATATGTAAGAGATGCTATGACAACTGCTGATCTCATCAAGAGAAATGATGTCGATGCTATGGAGATACATACAAATGGGAGGCAGAGTACACTGTTTGAAGAACTCTGGTGTGCTCTAGGAGATTCAGTAGGAAATTTGAGGCTAATAGCAGTTAGCTTACCTAATGGTGGGGATTCAACAATATCCTCTATGAACAAAATGTTCTCTATTATGAAACCCAATCTTAGAAGCTTCAACTTATGGCAGTTAGATGGCCGTCCCATGAGTGGAGATATTGGGAGAGGGGCAACTAAGGAATCAATTGCCTTTGCTGTTCAATTGGCTAAAGCAAAAGAAAGACCTCCTGGTTTTCTTCAACTTGCTGGTGGAACTAATGCTCACACAATAGATGGGTTGAAAAAAGAAGGACTCTTTCAAACAACCGTTACAGCAATCAGCTCGTCAAATTCATCACATGCTTTAATTAGCGGCATAGCTTATGGTGGCTATGCACGGAAGATTGTTGGTAGAGTATTGAGATCCATGCAATCTCAACATGGTGGAGCTGCTTCAATTGAGGATCATCCCGAGCATCTCTTGATGGCTCTTAAGGAAGCACTTGCTTTGGTTGGACCTGTTAAATGTCTTTGA 876 0.4155 MNVVSNAFRTEFDPEDCPADCTRPCENVCPANAISFQGKSTLGISYNTEAPRVLKDGVITERCYGCGRCLPVCPYDKIREVTYVRDAMTTADLIKRNDVDAMEIHTNGRQSTLFEELWCALGDSVGNLRLIAVSLPNGGDSTISSMNKMFSIMKPNLRSFNLWQLDGRPMSGDIGRGATKESIAFAVQLAKAKERPPGFLQLAGGTNAHTIDGLKKEGLFQTTVTAISSSNSSHALISGIAYGGYARKIVGRVLRSMQSQHGGAASIEDHPEHLLMALKEALALVGPVKCL. 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04094 291 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 8 39 IPR017896 -
Seca6g04094 291 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 47 290 IPR013283 -
Seca6g04094 291 Pfam Iron-Sulfur binding protein C terminal 93 286 IPR021039 -
Seca6g04094 291 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 63 74 IPR017900 -
Seca6g04094 291 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 54 83 IPR017896 -
Seca6g04094 291 Gene3D - 13 96 - -
Seca6g04094 291 SUPERFAMILY 4Fe-4S ferredoxins 11 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04094 Seca-Chr6 108626672 108630665 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04094 - - lang:109333641 524.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04094 6 108626672 108630665 Seca6g04094 6 108626672 108630665 ECH