Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04049 ATGGCTGTCACACATGCAGACCTTGAACCAAGTAGAAGTAAAACAGATTTGAGTAGCAAAACAGGTGCCTTCCTTATGGTTCTCACAATCCTATTAGGCCTCTTCTGTTTCATCCTATGTCTCATAGCAGAAGCCACACGTTCTGAGGTGACATGGATGAACACAGGTGGAAAAGAAAAGGATGCAAAATCGGAATGTGTTTACAATGGTAATGGGAAAGTGCCACTGCTATGTGCTGCTTCAGCTTTTGTTGGATTAGCAATTGCTATGGTCATGCAACATACTTACATGTTGATAGCAGTGAGTAAATCATCACCTTCTTTGCTTAACTGGGATCCTGATTCTCCTTCTGCTAAGTCCATAACATGGCAGGCTGGGTTTTTCTTCATTACAACATGGATTTGTTTTGCAGTTGCAGAAATTCTATTGCTGGCAGGACTAAGTGTAGAGTCAGGGCATCTGAAGAATTGGTCTAAACCTAGAACATGTTGTTATAGCATCAGAGAAGGGTTGTTCTCAGCTGCTGGGGTGTTTGCTTTAACCACAGTCTTCCTAGCTGCTGGTTTATACCTAACAGCACTTCGTGCTCAAAGAATTGCAGAGGAGCTAGCAAGTGTTCGAAGAGAGGTTCTTGAAGCCTCTGCTTTCTATGCTTCTCCACCAAGATCACCTCAAAGACATATCACAACTGTTGCCAGGGAGAACCCCACAACCACAGAGAGACAAAATGAGCATCTATTATCTGTATTTCCAACCCCTTTCAACAAAAGCTACAACTTTGTATAA 786 0.4249 MAVTHADLEPSRSKTDLSSKTGAFLMVLTILLGLFCFILCLIAEATRSEVTWMNTGGKEKDAKSECVYNGNGKVPLLCAASAFVGLAIAMVMQHTYMLIAVSKSSPSLLNWDPDSPSAKSITWQAGFFFITTWICFAVAEILLLAGLSVESGHLKNWSKPRTCCYSIREGLFSAAGVFALTTVFLAAGLYLTALRAQRIAEELASVRREVLEASAFYASPPRSPQRHITTVARENPTTTERQNEHLLSVFPTPFNKSYNFV. 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04049 261 Pfam Protein of unknown function (DUF1218) 82 183 IPR009606 -
Seca6g04049 261 PANTHER OS07G0462200 PROTEIN-RELATED 26 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04049 Seca-Chr6 108207117 108208695 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04049 - - qsu:112028361 368.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04049 6 108207117 108208695 Seca6g04049 6 108207117 108208695 ECH
Seca6g04049 6 108207117 108208695 Seca6g04049 6 108207117 108208695 PCT