Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04040 ATGACATATAGCTATGCAGTGATTGAGGGGGATGGTGTACTGGAAAAGGTTCAATCAGTTTCACATGAGATAAAGTTTAAGCCCAGTGCAAAGGGGGGTCGCAAGATCAAGACTGTTAGCAAGTATTATCCCAAACTAGAGGTTGAGATCAATGAAGAGGAAATTAAGTCTGGCAAGGAGAGGGTCTTGGGCATTTACAAAGTTGTAGAAACCTATCTCCTGCAGAACCCTGATGTGTATGCTTGA 246 0.4268 MTYSYAVIEGDGVLEKVQSVSHEIKFKPSAKGGRKIKTVSKYYPKLEVEINEEEIKSGKERVLGIYKVVETYLLQNPDVYA. 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04040 81 SUPERFAMILY Bet v1-like 1 80 - -
Seca6g04040 81 FunFam Major pollen allergen Bet v 1-A 1 80 - -
Seca6g04040 81 Gene3D - 1 80 IPR023393 -
Seca6g04040 81 PRINTS Major pollen allergen Bet V1 signature 31 47 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Seca6g04040 81 PRINTS Major pollen allergen Bet V1 signature 6 19 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Seca6g04040 81 PRINTS Major pollen allergen Bet V1 signature 65 75 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Seca6g04040 81 PANTHER - 1 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04040 Seca-Chr6 108093412 108093657 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04040 - - qsu:112006020 104.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04040 6 108093412 108093657 Seca6g04040 6 108093412 108093657 ECH