Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04028 ATGGTTGCTGCTGCTCGTTGGATTGCAAAGCTTTGCACTCCTACCCTACTTAAGGCTCTTGGTGAATGTCCAGACTTCAAAGTCAAGATTGTTGGGCACTCACTTGGTGGTGGTACTGCTGCACTGTTAACATATATTCTTAGAGAGCAGAAAGAGTTTTCTTCAAGCACTTGTGTCACATTTGCCCCAGCTGCTTGTATGACATGGGAATTAGCAGAATCGGGAAAGCACTTCATCACTACCATCATAAACGGTTCTGACTTAGTGCCCACTTTCTCAACTTCGTCTATTGATGATCTCCGTTCTGAGGTCACTGCTTCCTCTTGGTTGAATGATTTACGGGATCAGGTTGAACATACAAAGGTCCTCAATGTTGTCTACCGCTCTGCAACCGCACTTGGATCTCGCCTACCGTCTATATCTAGCGCAAAAGCTAGGGTAGCTGGTGCTGGTGCTATTCTGTGGCCAGTGGCCAGTGGCACTCAGGTTGTGATGAAGCGTGCACAGAGTGTTGCTGAAGCTGTTGTCAGAACTCGCTCATCGCTGTCATCATGGTCGTGCATGAGTGCACGCCGCCGAAATGTTGGTCCATCATCACCAATTTCTAAAACAGAAGACTTAACTGAAGTTTCTCTAATATCTGAGAGAACTACTGAATCTCTTTTGACCGAAGAGGTAGTGGCAGAGGCTTTGCTTAAGGATGAACATAATTCCTCAAGTGGAGGATCTGGCCATGATGACACAGACGAAGAGGAACAACTCATTCCTGCTAACCAAGACATTACCACATCCACTGTAGAGGACATCACAGAAGGCCAGTTATGGTATGAACTGGAGAAGGAGCTTCAAAAGCAGGATAATACCATGAACATTCATGCTCAGGAAGAGGCAGCAGCAGCAAAAGAGATCACTGAAGAAGAGAATCAACTTGTTGATGCTGCAGAATGCAGTAATTCAATCACAACATCAGACAACTTGGACAACCATCGATTTTATCCCCCAGGCAGAATCATGCATATTGTCTCTATACCTTCGTCTGATGATTCAAACTCAAATTCAAATTCTGATGATCCTGTAGAGGAACATGTCTGTTTATATGAAACACCTAGAGAGTTGTACAGCAAGCTCAGACTTTCAAGAACGATGATAAATGATCATTACATGCCAATGTATAAGAAGATGATGGAACTATTAATTCGAGAACTAGAGAAAGATAGCATTAGCAGCTCTAATATGTTATTGTGA 1245 0.4361 MVAAARWIAKLCTPTLLKALGECPDFKVKIVGHSLGGGTAALLTYILREQKEFSSSTCVTFAPAACMTWELAESGKHFITTIINGSDLVPTFSTSSIDDLRSEVTASSWLNDLRDQVEHTKVLNVVYRSATALGSRLPSISSAKARVAGAGAILWPVASGTQVVMKRAQSVAEAVVRTRSSLSSWSCMSARRRNVGPSSPISKTEDLTEVSLISERTTESLLTEEVVAEALLKDEHNSSSGGSGHDDTDEEEQLIPANQDITTSTVEDITEGQLWYELEKELQKQDNTMNIHAQEEAAAAKEITEEENQLVDAAECSNSITTSDNLDNHRFYPPGRIMHIVSIPSSDDSNSNSNSDDPVEEHVCLYETPRELYSKLRLSRTMINDHYMPMYKKMMELLIRELEKDSISSSNMLL. 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04028 414 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 1 406 - -
Seca6g04028 414 CDD Lipase 1 95 - -
Seca6g04028 414 Gene3D alpha/beta hydrolase 1 131 IPR029058 -
Seca6g04028 414 SUPERFAMILY alpha/beta-Hydrolases 2 95 IPR029058 -
Seca6g04028 414 Pfam Lipase (class 3) 4 93 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04028 Seca-Chr6 107987771 107993105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04028 1 409 Acyl Lipid Metabolism Gene Families AT4G16070 61.276 6.56e-149 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04028 - - gmx:100812454 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04028 6 107987771 107993105 Seca6g04028 6 107987771 107993105 ECH
Seca6g04028 6 107987771 107993105 Seca6g04028 6 107987771 107993105 PCT