Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04010 ATGAGCGCAGACACGAAGAAGAGCATAACCGGAGCTCTAACGCCGACACCACCCGCCCCCACCAAGAAAATCATCATCAAGAGTGCTGATATGATACCCGACATGCAAAAGGAGGCCGTTGATATCGCCTTCGCCGCGTTTGAGAATTACAATGTGGAGAAAGATGTTGCGGAACAGATAAAGAAGGAGTTCGATAAGAGGCATGGCCCCACTTGGCATTGCATCGTTGGTCGCAATTTCGGCTCATATGTTACCCATGAATCAAATCACTTCGTTTATTTTTATTTGGATCAGAAAGCGGTTTTACTTTTTAAATCTGGCTAG 324 0.4568 MSADTKKSITGALTPTPPAPTKKIIIKSADMIPDMQKEAVDIAFAAFENYNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGSYVTHESNHFVYFYLDQKAVLLFKSG. 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04010 107 CDD DLC-like_DYNLL1_DYNLL2 23 106 - -
Seca6g04010 107 PANTHER DYNEIN LIGHT CHAIN 22 107 IPR001372 GO:0007017|GO:0030286
Seca6g04010 107 FunFam Dynein light chain 19 107 - -
Seca6g04010 107 SMART Dynein_light_2 19 106 IPR001372 GO:0007017|GO:0030286
Seca6g04010 107 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 20 107 IPR037177 GO:0007017|GO:0030286
Seca6g04010 107 ProSitePatterns Dynein light chain type 1 signature. 73 87 IPR019763 GO:0005875|GO:0007017
Seca6g04010 107 Pfam Dynein light chain type 1 23 106 IPR001372 GO:0007017|GO:0030286
Seca6g04010 107 SUPERFAMILY DLC 20 107 IPR037177 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04010 Seca-Chr6 107762160 107767172 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04010 K10418 - gmx:100805882 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04010 6 107762160 107767172 Seca6g04010 6 107762160 107767172 ECH