Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03996 ATGGACTCCTCCCCCACCCCTCACTCCCTCCTCGCCTCCAACGTCTTCCTCTCCTTCCTCCTCTCCCCAAACGCCCCCGTTTTCACCCTCTTCACTCCTCTCTCCTTCCTCTCCTTCCTTCGTTCCATCCGCCGCTCCTTCAAAAACCGCACCAACCCACAACCCCACAACAACTCTTCCCAAAAACGCAAAAGAAAACGCCACGCTTCTAAAAAAGCCCCACAAAACGACGACGTCGACGCCGATTCCCAACAATCTGAAGAACTCGACGTTAGGGTTTTACTTCCTTTGTTGGAGAAGCTAGTTCGCGTCATGAGTTTGATTCACCTCGATCGTTTCCCCGAGAGTCTCAAGTCCCTGGTTCAAACCATCGCTGAGGTTCCCGTCATGGCGCTCGAGTCCTGCGGAAACACTGGACTATACAGCAAATTGGTTAATATCTGTTCGCGGGTGCTGAAGGAGGTTCTGAAACCTGAACATGGAGAATCTTCCAATACTGCTGCTGAAGTGTTGAAGTCGTTGTGTTCTCTCGTTCTCATGCCAAAGTCGCAAGCTAGGACCTTCGCCCTCGGTTTTGTCACGAGCCTGGCTAGTAGTGATTGCGATGGGGTGAAGAAGGCCCTGGTTAATTTTCCGAGGTATTTGGTGAAGAAGGCACCGGATAAGGCTGAACCCAGAGCATTGGCTGTGGATTCTATCATGGAGGTTGTTCGGGTAATGGAGTTTGAGGATCAAATTGAGTTTGTTAAGTACGTGGTGAAGATGGCTCAAGGGAAATCCAACCTTAGGCTTTTAGCGGTTGATCTTATTTTGAATCTGGTGACGTCGTTGAAGGATCCGTTGGGGGTGAATTCGGAGGAAGAAGGAAATGGGGCGTGGGGGATGTGGTGTTTGGAGGCATTGCTGAAGCGTTGTTCTGATGTGAGTGCTGCTATTCGAGCACGGGCTCTGTCAAGCCTGGCACAGCTGGTGGGGTTTCTCTCTAATGATGCTAAGGCTAGTGTGGTTTTGAAAGGGTTTATGGGGTTTGGTGAAGAAAATGTTGAAGGTGGTGGAATAAATGGTGTGCTGAGGAGAAGGTGTATGGATGAAAAGGCAGCTGTGAGGAAAGCTGCTCTTCTTCTGGTTACTAATTTAACTGCTCTTGTTGGGGGTGCAATTGATGAAGTGGTGCTCAAGACAATGGGGATGGCTTGTTCGGATCCACTTGTTAGCATGCGGAAAGCAGGGATCACAGCTCTTTCAGAGGCTTTCAGAAAATTCTCAGCTGAAACAGTGATAACTGAGTGGCTACATTCAGTCCCTCGTCTAATAACGGACAATGAATCTAGCATCCAAGAAGAATGTGAGAACATGTTTCAAGAACTTGTTTTGGACCGGATATCTAAAGCTGCATCTACTACCTCTTCATACAGGGAATCTGTATCTAGTAGAAACATAAAAGGAAAAGGATTAGACAAAGAGTTGGAGATGCTTTTTCCCCAAGGAATTCTGTATCTTCTGAGAGAGATTTGCAATGGGGAGGTGAGCCCTTGGGTGAAGAAGATTTGCACAAACCTGGGAAAAAAGAAACGGATGAATCACAAAATTGTTACTGCACTTCAGAATATAATCAGGGCATCAGAGTCTATCTGGCTGAGCCATTCCAAGCCAATAGAAAAGTGGACTGCCCCACCAGGTGCTTGGTTTCTTTTATCAGAGGTGTCAGCATTCCTTCCAAAAACAGTGGACTGGGATTTTCTTCATCATCATTGGCAGCTTCTTGACAAACATGAAGTGGAAGGTGAGTTTAAAAGCCCATTTGTACAAAGAAATGCATTTGAAGAGGAAGAAAGCATAGAATGCAATGCTGTTGCCTGGGCTAGTGACCGAGTTTTTCTCTTACAAACAATCTCTAATGTTTCTGTCGAGCTTCCTCCTGAACCTGCAGCTGATTTGGCTCATAACTTGCTCAAAAGGGTTGAAGAATTTAACATGCATTCAACAGAGGTTGATGCTCATATAAAAGCACTTAAAACATTGTGCAAGCGGAAAGCTTCAAATCTCGTGGAGGCAGAAGCATTGGTCTTGAAATGGGCACACCAAGTTCTCTCCAGAGCTTCTGAAATAATAGAAAAGTTCATTTCAGAAAACTCAGAGCAAAATGCAGAAACTGACTTCTTTACTCCACCTAGAAGTGGGACTAGAAAAGGCAAGAAATCAGTAGGAACAAGCAAGTCATTGTCAAAAGCAATTACAGCAATTTATACAATTGGGTCTTTAGTTATTGTCTGCCCATATGCTGATATGAGCACTGTAGTTCCATTATTGCATAGCATCATCACTTCTGGGAATACTGGTCCCAAATTAAATAAACTACCTGGCCCAGCAACCTCTCTACAACAAGAATCTCCTTCTTTTTATATTCAAGGGTGGTTGGCCATGGGCAAACTTTGCCTTGCTGATGGAAAGCTTGCAAAGAATTATATTCCTCTGTTTATACAGGAGCTTGAAAAGACTGAATCTGCAGCTCTTCGCAATAACATTGTGGTCATGATGGCAGATTTTTGTGTTCGGTACACTGCTCTTGTTGATAGGTAA 2580 0.4508 MDSSPTPHSLLASNVFLSFLLSPNAPVFTLFTPLSFLSFLRSIRRSFKNRTNPQPHNNSSQKRKRKRHASKKAPQNDDVDADSQQSEELDVRVLLPLLEKLVRVMSLIHLDRFPESLKSLVQTIAEVPVMALESCGNTGLYSKLVNICSRVLKEVLKPEHGESSNTAAEVLKSLCSLVLMPKSQARTFALGFVTSLASSDCDGVKKALVNFPRYLVKKAPDKAEPRALAVDSIMEVVRVMEFEDQIEFVKYVVKMAQGKSNLRLLAVDLILNLVTSLKDPLGVNSEEEGNGAWGMWCLEALLKRCSDVSAAIRARALSSLAQLVGFLSNDAKASVVLKGFMGFGEENVEGGGINGVLRRRCMDEKAAVRKAALLLVTNLTALVGGAIDEVVLKTMGMACSDPLVSMRKAGITALSEAFRKFSAETVITEWLHSVPRLITDNESSIQEECENMFQELVLDRISKAASTTSSYRESVSSRNIKGKGLDKELEMLFPQGILYLLREICNGEVSPWVKKICTNLGKKKRMNHKIVTALQNIIRASESIWLSHSKPIEKWTAPPGAWFLLSEVSAFLPKTVDWDFLHHHWQLLDKHEVEGEFKSPFVQRNAFEEEESIECNAVAWASDRVFLLQTISNVSVELPPEPAADLAHNLLKRVEEFNMHSTEVDAHIKALKTLCKRKASNLVEAEALVLKWAHQVLSRASEIIEKFISENSEQNAETDFFTPPRSGTRKGKKSVGTSKSLSKAITAIYTIGSLVIVCPYADMSTVVPLLHSIITSGNTGPKLNKLPGPATSLQQESPSFYIQGWLAMGKLCLADGKLAKNYIPLFIQELEKTESAALRNNIVVMMADFCVRYTALVDR. 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03996 859 Gene3D - 297 467 IPR011989 -
Seca6g03996 859 MobiDBLite consensus disorder prediction 48 84 - -
Seca6g03996 859 PANTHER CONDENSIN 9 859 IPR026971 GO:0007076
Seca6g03996 859 SUPERFAMILY ARM repeat 162 856 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03996 Seca-Chr6 107638450 107644879 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03996 K11491 - gmx:100781242 1316.21