Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03987 ATGGCACTCAGACCCATTGATAATGCTCTTCCAACAACCCCAGAAAGACCCAAGAAACTACCCAAGATCGCTGTTGCAACCCAAAAACAACAAGTCCGTGTTGTCAATGACGAAAACCAACTTCCATCTGGGGATGCCACCATTGACTATATCTCCTCTGACAACCTTAAACCCTTGTCGGATCCTGAAGCTAAGATTCAAGGTTTGACTGAAGATTTAGATTCAAAAAATTGGACCAAGGTCTGTGAGTCACTAAATGATGTTAGGCGCTTCGCATTGTACCACTCTTCTCTTCTATTCCCCATCTTGGGAAAAATTGTGTTGGTGGTGACGAAGACAATGAAGAATCCTCGTAGTGCTCTATGCAAAACCTCTATTATGGCTGCTTCTGACATTTTCAATGCCTTTGGTGACAAGTTGCTTGATCCCTCCACCTCTGCTGCATTTGATGGCTTGCTGCTACAGCTGCTGCTGAAAGCATCCCAAGATAAGAAGTTTGTGTGTGAAGAAGCTGAGAGGGCACTTGGTTCAATGGTTGGTTCCATGACCCCTCTTCCTTTGCTTCAGAAACTAAGGACATGTGTGAGTCACACCAATCTCAGGATCAGGGCTAAAGCTGCTGTTTCTCTCTCCAATTGTGTCTCCAAGATGCAGGGGATTGAAGAAATGGAGGAATTTGGGATGGCTGAATTGATTGAAGTGGCAGCGGATTTACTGAATGATAGACTTCCAGAGGCAAGAGATGCAGCAAGAAGTATTGCAACTTCAATGCACGAGGCACTCACGAAGGGTGTGGAAGTGGAACAGAAGATGGAGGTGTGGCAGAGCTTCTGCCAATCTAAGCTGCAACCAATTCATGCTCTTTCAATTTTGAAGATAGTTAAATAA 888 0.4459 MALRPIDNALPTTPERPKKLPKIAVATQKQQVRVVNDENQLPSGDATIDYISSDNLKPLSDPEAKIQGLTEDLDSKNWTKVCESLNDVRRFALYHSSLLFPILGKIVLVVTKTMKNPRSALCKTSIMAASDIFNAFGDKLLDPSTSAAFDGLLLQLLLKASQDKKFVCEEAERALGSMVGSMTPLPLLQKLRTCVSHTNLRIRAKAAVSLSNCVSKMQGIEEMEEFGMAELIEVAADLLNDRLPEARDAARSIATSMHEALTKGVEVEQKMEVWQSFCQSKLQPIHALSILKIVK. 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03987 295 SMART TOG_3 55 288 IPR034085 -
Seca6g03987 295 PANTHER CLASP 38 260 - -
Seca6g03987 295 Pfam CLASP N terminal 99 260 IPR024395 -
Seca6g03987 295 SUPERFAMILY ARM repeat 66 263 IPR016024 -
Seca6g03987 295 Gene3D - 36 283 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03987 Seca-Chr6 107546896 107548775 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03987 - - lja:Lj6g3v1445630.1 483.411