Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03981 ATGCTGGAACGGTGTCTGGGAACTCGGCGAGTCCGTCAGATCCAGAGGACGTGCCGCCACAGCACCGTCACCTTCCTCTGCCTCTTCCTCACCATCATGGTCCTCCGCGGCACCATCGGCGCCGGCAAATTCGGCACGCCGGAGCAAGACTTCAACGAGATCCGCCACCACCTCTCCGCCGCCCGCACCCGCCGCGTCCTCGAAGAATCCCAACCCGAAAACAACAACAACAACAACTACGCCACCTTCGATCTCTCGAAGATCCTCGTCGATGAAGACTCCGGCGACGACGAAAAGCGTGACCCGAACGCGCCCTACACCCTCGGCCCTAAGATTTCTGATTGGGATGAAAAGCGCAGCGAGTGGCTCCGAAACAACCCGGATTACCCGAATTTCATTGGACCCAACAAACCCCGGGTTCTTCTGGTAACCGGGTCTTCACCCAAACCGTGTGAGAATCCGGTTGGGGATCATTACCTTCTGAAGTCAATTAAGAACAAGATAGACTATTGCAGGGTTCATGGGATTGAGATTTTCTACAATATGGCACTTTTGGATGCTGAAATGGCAGGGTTTTGGGCTAAGCTTCCTTTGATTAGAAAGCTATTGTTGTCTCACCCTGAGGTTGAGTTCCTTTGGTGGATGGACAGTGATGCTATGTTCACTGACATGGCTTTTGAAGTGCCATGGGAAAGGTACAGAGATTACAACTTTGTGATGCATGGGTGGAATGAGATGGTGTATGATGAGAAGAATTGGATTGGTTTGAACACTGGGAGTTTTCTGTTGAGGAATTGTCAGTGGTCTTTGGATATTCTTGATGCTTGGGCACCTATGGGTCCAAAAGGGAAGATTAGAGATGAATGGGAAAGTGCTAACTAG 882 0.5102 MLERCLGTRRVRQIQRTCRHSTVTFLCLFLTIMVLRGTIGAGKFGTPEQDFNEIRHHLSAARTRRVLEESQPENNNNNNYATFDLSKILVDEDSGDDEKRDPNAPYTLGPKISDWDEKRSEWLRNNPDYPNFIGPNKPRVLLVTGSSPKPCENPVGDHYLLKSIKNKIDYCRVHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYRDYNFVMHGWNEMVYDEKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKIRDEWESAN. 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03981 293 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 136 282 IPR029044 -
Seca6g03981 293 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 6 290 IPR008630 GO:0016020|GO:0016757
Seca6g03981 293 FunFam xyloglucan 6-xylosyltransferase 2 136 287 - -
Seca6g03981 293 Pfam galactosyl transferase GMA12/MNN10 family 137 291 IPR008630 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03981 Seca-Chr6 107493414 107494295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03981 1 288 Glycosyltransferase AT3G62720 74.086 8.20e-165 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03981 K08238 - gmx:100818287 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03981 6 107493414 107494295 Seca6g03981 6 107493414 107494295 ECH