Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03980 ATGGCTTCTCAAAGCCTACATGAAACAAAGAAATCCCAAGCCAAGCGAGCACTACGTTCCCTAGCTATAGGAATTGCAGTCCCTCTCACCTTCACATTGACAATAATCATCCTCTTCGGTTCAGGGCGCAAGTACCATCGGCTAGCCAAGCCTTTTTGGTTCGCACCACTTTGGTTCATTCACTTAGCCACGTTGGGTTCATCTTTCTTCATGGGTCTCGCCGCTTGGCTAGTGTGGGCCGATGGTGGGTTTCAAGGGGAAACGGATGCGTTGTCTCTCTATGTAGCTCATGTTTCTCTAAGCATTGTGTGGCACCCCCTTGTGCTTATTATGAGTGCTTATTGGCTTGCTTCCATTTCTTGCATTCTCAATTTTGGGACCCTCTTTTTGTGTTATTTGAGGTTTAGAAAGGTCAACCCTTTTGCTAAAGATCTGGCCAAACCATGCCTGGTATGGACTGCATATCTTACTCTTGTTAGCTTCAAGCTAATGTTTCTTTGA 501 0.4571 MASQSLHETKKSQAKRALRSLAIGIAVPLTFTLTIIILFGSGRKYHRLAKPFWFAPLWFIHLATLGSSFFMGLAAWLVWADGGFQGETDALSLYVAHVSLSIVWHPLVLIMSAYWLASISCILNFGTLFLCYLRFRKVNPFAKDLAKPCLVWTAYLTLVSFKLMFL. 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03980 166 CDD TSPO_MBR 23 161 IPR004307 GO:0016020
Seca6g03980 166 Pfam TspO/MBR family 40 165 IPR004307 GO:0016020
Seca6g03980 166 Gene3D TspO/MBR protein 15 166 IPR038330 -
Seca6g03980 166 PIRSF PBR 10 166 IPR004307 GO:0016020
Seca6g03980 166 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 17 164 IPR004307 GO:0016020
Seca6g03980 166 FunFam translocator protein 2 17 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03980 Seca-Chr6 107489356 107489856 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03980 K05770 - gmx:100790873 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03980 6 107489356 107489856 Seca6g03980 6 107489356 107489856 ECH