Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03949 ATGGAGGGTACATCACAAGTGCAACTAGTTTGTCATCAATCTCTCAGCATGACCCCTTCTAAAAACAATACAAATGAAATCGAATCCATTGATCAAGAAACTATAGAAGAAGCACATCCAAATCTACCTTCACTAGTGAACAACAAAAAGCACTTGCATCCAGATCAAAAGTCCATCACTAACAAGAGGTACATTCCCCTTTTAGTGATCAATTACCTTTTGCTCTTTGTTGGTTCCATCTCTTCTAGTTTACTTTCAAAGTACTATTTCATCCACAAAGGTTCAAGCAAATGGGTTTCAACTTGGGTTCAGTGTGCAGGCTTTCCCCTTTTGATGATCCCAATTTGTCTCCCTTATCTCATTAAATTCACAAGGAGAAAGCCCTTCACCGATTTCAACACAAAGATGTTATCTTTATCAATTTTTGTTGGTGTTATGTTAGGGCTTAATAATCTTCTTATCTCATGGGGTGTTGCATATCTCCCAGTCTCAACCTCAGCACTTTTGTTATCCTCTCAGTTGGTTTTCAATCTCATTCTCTCTGCCATAATTGTGAAACAAAAAATAACCTTTTCAAATCTCAATTGTGTCATCCTTCTTACTTTAAGCTCCATCATTCTTGCATTGGATTCTAGTAATGAAAGACCAAAAGGGCTCAGTCAACGGAACTACTTCATTGGGTTCTTTTGCACCATAGGTGCAGGTTTGTTGTTTGCCCTGTATTTGCCAGTGATGGAGAAGATTTATAAGAAGGTCTATTGCTATGAAATGGTGATGGAAATGCAGCTTGTGATGGAAATTGCAGCAACGACATTGGCCACAGTAGGCATGGCATGGGATGGAGGATTCTCTCAAATGAAGGAAGAGAGCCAAAGGATTTTTGATAAACGGTCTACAGTTTATTGGGTAACTGTGATGGCAAATGTTGTGACTTGGCAATTTTGCTTTATGGGCACTGCAGGAATGGTGTTTTTGACATCTTCACTAACAGGGGGAATTTGTATGACAGCTTTGTTGTCCATGAATGTGTTAGGAGGTGTTGTGGTGTTCAAGGATGCCTTTGACGGTTTCAAAGCAGTGTCAACTATTTTGTGTGTGTGGGGATTCTGCTCTTATGTCTATGGCATGTACAACAAAACGGTGGAAGAGAAAGCTCGAATGAGGAACAAAAATGAATCATCCACAGAGTTGATCCCTATCAAGAATGATGTAAGTTGA 1218 0.3941 MEGTSQVQLVCHQSLSMTPSKNNTNEIESIDQETIEEAHPNLPSLVNNKKHLHPDQKSITNKRYIPLLVINYLLLFVGSISSSLLSKYYFIHKGSSKWVSTWVQCAGFPLLMIPICLPYLIKFTRRKPFTDFNTKMLSLSIFVGVMLGLNNLLISWGVAYLPVSTSALLLSSQLVFNLILSAIIVKQKITFSNLNCVILLTLSSIILALDSSNERPKGLSQRNYFIGFFCTIGAGLLFALYLPVMEKIYKKVYCYEMVMEMQLVMEIAATTLATVGMAWDGGFSQMKEESQRIFDKRSTVYWVTVMANVVTWQFCFMGTAGMVFLTSSLTGGICMTALLSMNVLGGVVVFKDAFDGFKAVSTILCVWGFCSYVYGMYNKTVEEKARMRNKNESSTELIPIKNDVS. 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03949 405 Pfam Purine nucleobase transmembrane transport 67 379 - -
Seca6g03949 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 119 212 - -
Seca6g03949 405 PANTHER OS09G0467300 PROTEIN-RELATED 57 387 IPR030182 GO:0015211|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03949 Seca-Chr6 107214319 107215536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03949 62 375 Organic Solute Cotransporters AT1G30840 64.873 2.03e-141 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03949 - - mtr:25488190 600.127