Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03946 ATGGCCAAAGAGAGAGAGAAGAGGCTTTACGTGGCTTTACTTGGAAACTACGCCGCAGAACTCAAGCTCCTTCTCACCACTCTCCTTCTCCTCTGCACCGTCGCAACTTTCCTTCAGTTCATCCCTTCTCGTTTCACTTTCTCAGCTTCTGATCTACGCTTCTGCATCTCAAGAGTCACTCAAACAACAACCGCCGTAACGGAAACGCCTCCCTCTGTTACGGAAACACCTCCCTCCGTTACGTCTTCCTCTGTTTCTGCTCCACAGCTTCCTCCACCGCCTCCGCCGCCTCTCGCCGCCGTAGCAGAACATGAGCGAGTGGTGGAAAACGGAATCATAAAACGCGTTTTCAACCCTTATGGTTCTGCTGCTTACAACTTCATCAGCATGGGCGCATACAGAGGAGGACTCAACACCTTCGCCATTATTGGCCTCGCTTCCAAGCCCCTCCATGTTTACGCCAAACCCACTTACGAGTGTGAATGGGTCTCCTCCGGCGCCGGCGACGGAGATAAATCCTCTGTCAAAACCGTCGGCTACAAGATCCTCCCTGACTGGGGCTACGGCCGTGTCTACACGGTGGTGATTGTCAACTGCACATTCCCGGAGCCTCTCAATGCTGAAAACTCCGGCGGGAAGCTGGTTCTCTACGCCTCCACCTCCGGCGGCGGCGACGCCAGCTTCAACGTCACCGACAGGATGGAGGTTCTCACCGAAGCGCCGGGGACTCTAGATGTTTCTCTGTTCACTTCAAAGCCAAAATATGAATACTTGTATTGTGGGTCCTCTTTGTATGGGAACCTGAACCCACAAAGGGTGAGGGAGTGGATCGCTTACCATGTGAAGTTTTTCGGGCCAAGTTCACATTTTGTGATACATGATGCTGGTGGGGTGCACGAGCAGGTTTTGGAGGTTTTGAAGCCGTGGATGGAACTTGGGTATGTGACTCTGCAAGATATCAGGGACCAAGAGAGGTTTGATGGGTATTATCACAACCAGTTTATGGTGGTGAATGATTGTTTGCATAGGTATAAGTTCATGGCTAAGTGGATGTTCTTTTTTGATGTGGATGAGTACATCTATGTGCCCCCTAAGAGCACCATTAAGACCGTGCTTGATTCACTCTCCGAATACTCTCAGTTCACCATTGAACAGATGCCAATGAGCAGCAAGCTCTGCCTCTCCGCTGATTACGGCAAAACCTATAGGAAATGGGGGTTTGAGAAGCTGGTGTATAAAGATGTGAAGAAAGGAATTAGAAGAGATAGAAAATATGCGGTGCAACCGCGTAGCTTGTTTGCAACAGGGGTTCACATGTCACAGAACCTAGCAGGAAAGACAACTCACAAAACTGAAGGGAAGATAAAATACTTTCATTATCATGGAACCATAGCTGAAAAGAGAGAATCATGTAAAATGCTTATAAATTCAACAGAACTCACCTATGACAAAACCCCCTATGTGTTGGATACCACCATGAGGGATATTGCTGGCGTGATCAAGAAATTTGAGCTCAAGATGATTGGAGACAGACTACAAAAGAAACGGCAATGA 1554 0.4858 MAKEREKRLYVALLGNYAAELKLLLTTLLLLCTVATFLQFIPSRFTFSASDLRFCISRVTQTTTAVTETPPSVTETPPSVTSSSVSAPQLPPPPPPPLAAVAEHERVVENGIIKRVFNPYGSAAYNFISMGAYRGGLNTFAIIGLASKPLHVYAKPTYECEWVSSGAGDGDKSSVKTVGYKILPDWGYGRVYTVVIVNCTFPEPLNAENSGGKLVLYASTSGGGDASFNVTDRMEVLTEAPGTLDVSLFTSKPKYEYLYCGSSLYGNLNPQRVREWIAYHVKFFGPSSHFVIHDAGGVHEQVLEVLKPWMELGYVTLQDIRDQERFDGYYHNQFMVVNDCLHRYKFMAKWMFFFDVDEYIYVPPKSTIKTVLDSLSEYSQFTIEQMPMSSKLCLSADYGKTYRKWGFEKLVYKDVKKGIRRDRKYAVQPRSLFATGVHMSQNLAGKTTHKTEGKIKYFHYHGTIAEKRESCKMLINSTELTYDKTPYVLDTTMRDIAGVIKKFELKMIGDRLQKKRQ. 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03946 517 MobiDBLite consensus disorder prediction 65 99 - -
Seca6g03946 517 MobiDBLite consensus disorder prediction 65 86 - -
Seca6g03946 517 Pfam Glycosyltransferase family 92 256 495 IPR008166 -
Seca6g03946 517 PANTHER UNCHARACTERIZED 30 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03946 Seca-Chr6 107192810 107195986 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03946 K23869 - gmx:100787815 844.728