Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03913 ATGACGACGGGAACACAAGCCTACGGTGAACCATGGTACTGGGACAACCGCTACTCCAATGAACCTGGTCCTTTTGATTGGTACCAAAAGTACCTTACTTTGGCTCCCATCATCAACCTCTATGTTCCTCGTAACCACCTCATCCTTGTTGTCGGTTGTGGCAACTCAGGCAAATTTGTGTTGTTTGCAGCCTTCAGCGAAGGCTTGGTTGATGAAGGTGGTTACACGGATGTTGTTAACATTGATATATCTTCGGTGGTGATTGAAGCTATGCAGAACAAATACCGAGATCGTCCCCAGATGAAGTATATGAAAATGGATGTCAGAGACATGAGTGCTTTTGAATCAGAATCGTTTGGTGCTGTTATTGACAAAGGGACTCTTGACTCTATCTTGTGTGGAAATAATTCAAGACAATATGCTACTAAGATGCTTGAGGAAATTTGGAGGGTCCTCAAGGATAAAGGAGTCTATATTCTGGTGACATATGGAGCTCCACTATATCGCCTACGTTTGCTACGGGATTCATGCTCGTGGACAATAAAACTCCATGTGATAGATAAACTTGCATCAGAAGAAAAATCTGATAATCCAGTTTGGGAGCTGACAAAACCTGTTCCACTTAATGATGATGGAAGCTCTGTGGAGGAAGCCTTAGGACAGAATCCTGATGTCCATTATATATACATCTGCACTAAGGAAATTTCTGTTAACTGA 717 0.424 MTTGTQAYGEPWYWDNRYSNEPGPFDWYQKYLTLAPIINLYVPRNHLILVVGCGNSGKFVLFAAFSEGLVDEGGYTDVVNIDISSVVIEAMQNKYRDRPQMKYMKMDVRDMSAFESESFGAVIDKGTLDSILCGNNSRQYATKMLEEIWRVLKDKGVYILVTYGAPLYRLRLLRDSCSWTIKLHVIDKLASEEKSDNPVWELTKPVPLNDDGSSVEEALGQNPDVHYIYICTKEISVN. 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03913 238 Gene3D Vaccinia Virus protein VP39 6 234 IPR029063 -
Seca6g03913 238 PANTHER SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 6 235 - -
Seca6g03913 238 Pfam Methyltransferase domain 49 159 IPR013216 GO:0008168
Seca6g03913 238 FunFam S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 6 205 - -
Seca6g03913 238 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 8 180 IPR029063 -
Seca6g03913 238 CDD AdoMet_MTases 48 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03913 Seca-Chr6 106829963 106832661 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03913 - - gmx:100792939 414.075