Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03853 ATGTTGGGGGGTGCACTCTCAACCCCAACAACTCAAAGCCTCAAGGCAACAACAACACTTGCAGTGCTTCATCCAACTCATACATTATTATCTACCCATCTTTGTCTCTGTAAGAACCTAGTATCAAGTACCAGAGGATTTTCTTCAAAAGAGAGTTGTTTTCTCAGAGGTCACCAAATCAACATCAAGCAATTTTTTGGGCTTATCTCAGGTCGTGCTCCACGAAAAAAATCAGGAGTTGTTGTTTCTCCAATCTGTGGCCTGCCACTTACAGAAGAGAATGTGGAGAAGGTTTTGGATGAGGTAAGGCCTGGCTTGATGGCTGATGGAGGGAATGTGGCTTTGCATGAGATAGATGGCCTTAATGTTATCCTCAAGCTACAAGGAGCATGTGGATCATGTCCTAGCTCAACTATGACATTGAAGATGGGAATTGAAACTCGCCTCAGGGATAAGATTCCAGAAATCATTGCAGTGGAGCAGATACTAGACACTGAGACTGGCCTTGAGTTAACTGAAGAAAATGTTGAAAGTGTAGTTCTTTCTGAAATTAGACCATACCTTGTTGGCACTGGGGGAGGAATATTAGAGCTTGTTCAGATAAATGATTATGTTGTCAAAGTTCGGCTAAGTGGACCAGCAGCTGGGGTTATGACAGTTCGTGTTGCCTTAACACAGAAGCTGAGAGACAAAATACCTTATATTGCGGCTGTGCAGCTAATAGACTGA 729 0.4307 MLGGALSTPTTQSLKATTTLAVLHPTHTLLSTHLCLCKNLVSSTRGFSSKESCFLRGHQINIKQFFGLISGRAPRKKSGVVVSPICGLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLNVILKLQGACGSCPSSTMTLKMGIETRLRDKIPEIIAVEQILDTETGLELTEENVESVVLSEIRPYLVGTGGGILELVQINDYVVKVRLSGPAAGVMTVRVALTQKLRDKIPYIAAVQLID. 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03853 242 Gene3D - 170 242 IPR034904 -
Seca6g03853 242 Gene3D - 86 169 IPR034904 -
Seca6g03853 242 FunFam NifU-like protein 3, chloroplastic 87 169 - -
Seca6g03853 242 Pfam NifU-like domain 95 160 IPR001075 GO:0005506|GO:0016226|GO:0051536
Seca6g03853 242 Pfam NifU-like domain 177 239 IPR001075 GO:0005506|GO:0016226|GO:0051536
Seca6g03853 242 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 92 166 IPR034904 -
Seca6g03853 242 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 175 241 IPR034904 -
Seca6g03853 242 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 87 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03853 Seca-Chr6 106089212 106091807 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03853 - - gmx:100806364 370.933