Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03844 ATGGCAACCGAATCGAATGAGAACACAAGAAGGAATGCCCTTGTGGTGAGGAAGCCATGCTTTGGCCTTCCAACTGGCTGCCCTCAATGCTTGTCTGCTTACATCTATCTCAAGCTCTCTCAACTTCCCTTCCACTTGGACTACCACATTAACTATCCTGATTCTGATCAAATTCCTTACTTTGAGGCTGATGATTGTGTGGCATATAATAATGAGAAGGAGGGGATCATTGAGTGCTTGAAAAGGGATGTAGGTGATTTGGATATTGGGGTCTCTTCTCTCCCTGACTGGATACGAACCAAAGTGATGCTCACCACTTGGCTTGCTGATGCACTTGAGTATGAACTGTGGGTGGGATGTGACGGTTCCTCTGCTTATAACATCTATTATTCTGATCTTCCATGGCCTATTGGAAAGGTTCTGTTTTGGAAGAAAGCTCACTGGGTAAAGCAGAAACATGGGATAAGTAAAGACAATGCTGAAGTAAAGGAAGAAGAGATTTATGGGAGAGCGAACTCTGCATATGATGCTCTGTCAACTTGGTTAGGGGGGCAAAACTACTTATTTGAAAACAGGCCATCAAGCTTGGATGCTATTTTCATTTCACATGCATTAGTTGTTCTTCAGGCTTTACCTGAATCATCAGTGTTGCGGATAAATTTTTTGGAACATGCTAATTTAGTGAGATATGTGCAACAATATAAGACCGAACTTATAGAAGCTGGTACATCCCCTTCCAGTGATCCATATTTTCATGCAGACACATCATCATCAGCTTCCAAAGGCTCTTCAGCTTCAATGGTTTGA 807 0.4238 MATESNENTRRNALVVRKPCFGLPTGCPQCLSAYIYLKLSQLPFHLDYHINYPDSDQIPYFEADDCVAYNNEKEGIIECLKRDVGDLDIGVSSLPDWIRTKVMLTTWLADALEYELWVGCDGSSAYNIYYSDLPWPIGKVLFWKKAHWVKQKHGISKDNAEVKEEEIYGRANSAYDALSTWLGGQNYLFENRPSSLDAIFISHALVVLQALPESSVLRINFLEHANLVRYVQQYKTELIEAGTSPSSDPYFHADTSSSASKGSSASMV. 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03844 268 Pfam Glutathione S-transferase, C-terminal domain 171 233 IPR033468 -
Seca6g03844 268 PANTHER METAXIN RELATED 14 241 - -
Seca6g03844 268 SUPERFAMILY GST C-terminal domain-like 129 234 IPR036282 -
Seca6g03844 268 CDD GST_C_Metaxin 166 231 - -
Seca6g03844 268 Pfam Glutathione S-transferase N-terminal domain 28 118 IPR012336 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03844 Seca-Chr6 105978310 105983230 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03844 K17776 - gmx:100809392 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03844 6 105978310 105983230 Seca6g03844 6 105978310 105983230 ECH
Seca12g00757 12 7013763 7017391 Seca6g03844 6 105978310 105983230 PCT