Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03834 ATGAAGACAGATAAAGTTTGGCGCCTAGGCATGGGTGATATGCATATCTTGCCTGGGACTCGCCACCGTCCTCCCATGAAGAAGCCAATGTGGATTATTGTCTTGGCTTTGTTTGTGTGCGTGTTTCTAATATGTGCTTATATTTACCCGCCAAAAAGCAGTACAGCTTGTTATGTCTTTTCTTCTAAAGGGTGCAAGGCTATTGCTGATTGGCTTCCACCTGTTCCTGCAAGGGAATTCACAGATGATGAGATTGCATCACATGCTGTTATTAGGGATATTTTAAACACACCACCAGCTCTTTCAAAAAATCCAAAAATTGCCTTCATGTTTTTGACACCTGGTTCTCTACCATTTGAAAATTTGTGGGATAAATTTTTCCAAGGTCATGAAGGGAAGTTCTCTGTTTATGTGCATGCATCTAAAACTAAACCAGTTCATGTGAGCCGCTATTTTGTTAATCGGGATATACGCAGTGACCAGGTGATATGGGGTAAAATTTCTATGGTTGATGCAGAGAGACGACTATTGGCAAATGCCCTACAAGATCCTGATAACCAGCAATTTGTTTTACTTTCTGATAGCTGTGTGCCACTGTATAATTTTGACTATATTTTTTATTATCTGATAAATACAAATATCAGCTTTGTTGACTGCTTCTGGGATCCTGGTCCTCATGGCAATGGCAGGTATTCAGAACGCATGTTACCTGAAGTTGAAATGAAGGACTTTAGGAAGGGTGCTCAGTGGTTTTCTATGAAGCGGCAGCATGCTGTTGTAGTTATGGCTGACAATCTGTATTACACAAAATTTCGGGATCACTGTCAGCCTGGTTTGGAAGGGAAAAATTGCATCGCAGATGAGCATTACTTGCCTACCTTCTTCAAGATTGTCAATCCTGGTGGAATTGCAAACTGGTCAATAACTCATGTTGACTGGTCTGAGAGAAAATGGCATCCAAAATCTTATAAGGCTCAAGATGTTACAGATGAGCTTTTGAAGAATATTACGTCCATTGATGTAAGTGTGCACGTCACCAGTGATGAGAAGAGAGAAGTACAAAGATGGCCTTGCTTATGGAATGGGATTCAGAGGCCATGCTACCTATTTGCTAGGAAATTCACTCCCGGAACACTGGACAGTTTATTGCACCTTTTTTCTAATTATTCATCGCCTTGA 1179 0.408 MKTDKVWRLGMGDMHILPGTRHRPPMKKPMWIIVLALFVCVFLICAYIYPPKSSTACYVFSSKGCKAIADWLPPVPAREFTDDEIASHAVIRDILNTPPALSKNPKIAFMFLTPGSLPFENLWDKFFQGHEGKFSVYVHASKTKPVHVSRYFVNRDIRSDQVIWGKISMVDAERRLLANALQDPDNQQFVLLSDSCVPLYNFDYIFYYLINTNISFVDCFWDPGPHGNGRYSERMLPEVEMKDFRKGAQWFSMKRQHAVVVMADNLYYTKFRDHCQPGLEGKNCIADEHYLPTFFKIVNPGGIANWSITHVDWSERKWHPKSYKAQDVTDELLKNITSIDVSVHVTSDEKREVQRWPCLWNGIQRPCYLFARKFTPGTLDSLLHLFSNYSSP. 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03834 392 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 31 383 IPR044174 GO:0016757
Seca6g03834 392 Pfam Core-2/I-Branching enzyme 107 336 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03834 Seca-Chr6 105840535 105846920 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03834 - - gmx:100817202 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03834 6 105840535 105846920 Seca6g03834 6 105840535 105846920 ECH