Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03809 ATGGATTCTTACGCAACAAAAAACTGGAAGCACTCTGTGCTCTACCTCACATTCGTGATTGCAATTATACACCTTACTCAAAGCCATTTCTCACGTAAATTGTTCCTTGGCAACGAAACTGTGCGCATCAAGAAGATGCCCGATCTTCCTATCCGGTTCCGTTCCGATGGTACCTTCAAAATCCTCCAGGTAGCTGATATGCATTATGGAAGTGGAAGGATAACCCGGTGCAGGGACGTGCTGGCTTCTGAGTTCGAGTTCTGTTCCGACCTTAACACCACTCGATTTTTGAAGCGCATCATTCAGGCCGAGAATCCTGATTTTATCGCATTTACTGGGGATAATATATTCGGATCAAGCACCCCTGATGCTGCAGAATCTCTGTTTGAAGCATTTGGTCCTGCCATGGAATCAAGACTTCCTTGGGCTGCAGTTCTGGGAAATCATGACCAAGAATCAACGCTGAATCGTGAAGAATTAATGTCCTTAATCTCCCTTATGGACTATTCAGTCTCACAAATCAACCCGTCAGCTGATGGTCTCACTAATCCTACTAAAGGTGGCGTAATGACTGAAATTGATGGCTTTGGGAATTATAACCTGAGAGTATATGGTGCCCCAGGTTCCATGCTGGCAAACAGCACTGTTTTGAATCTTTTCTTTCTTGACAGTGGAGACGAGGCTGTTTATCAGGGAATTCAAACGTATGGATGGATCAAGGACTCTCAACACCATTGGCTTCGTCGAGTTTCACAAGAATTCCAGGTCACACACTAA 777 0.4466 MDSYATKNWKHSVLYLTFVIAIIHLTQSHFSRKLFLGNETVRIKKMPDLPIRFRSDGTFKILQVADMHYGSGRITRCRDVLASEFEFCSDLNTTRFLKRIIQAENPDFIAFTGDNIFGSSTPDAAESLFEAFGPAMESRLPWAAVLGNHDQESTLNREELMSLISLMDYSVSQINPSADGLTNPTKGGVMTEIDGFGNYNLRVYGAPGSMLANSTVLNLFFLDSGDEAVYQGIQTYGWIKDSQHHWLRRVSQEFQVTH. 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03809 258 Pfam Calcineurin-like phosphoesterase 59 244 IPR004843 GO:0016787
Seca6g03809 258 SUPERFAMILY Metallo-dependent phosphatases 58 253 IPR029052 -
Seca6g03809 258 Gene3D - 58 255 IPR029052 -
Seca6g03809 258 PANTHER PHOSPHATASE DCR2-RELATED-RELATED 17 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03809 Seca-Chr6 105537889 105542130 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03809 - - gmx:100818515 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03809 6 105537889 105542130 Seca6g03809 6 105537889 105542130 ECH