Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03803 ATGTGGTTTACCTTCTGGAGATCCAGAGATCGTTTTTCCTTGGATCAACTCAGGTACTTAACTGATCAATTGACAAAGGTTCAGATAGTTAATGAGGTTAATAAGGATTTTGTCATTGAGGCACTGAGGTCAATTGCAGAGTTGATAACATATGGCGACCAACATGATGCAAGCTTCTTTGAATTCTTCATGGAAAAGCAAGTTGTGGGGGAGTTTGTACGTATTCTAAAACTTAGCAGGACTGTTAGCATTCCGCTTCAATTGCTACAAACAGTGAGCATTATGATCCAGAACCTAAAAAGTGAACATGCTATATACTATATGTTTAGTAATGAACATATGAACTACCTAATTACATATTCATTTGACTTTCGCAACGAAGAGCTATTGTCATACTACATATCCTTTTTAAGAGCAATAAGCGGAAAATTGAACAAGAATACTATTTCTCTGCTTGTGAAGACTTGCAATGATGGAGTAGTTTCATTTCCACTGTATGTCGAGGCAATACGCTATGCATTTCATGAGGAGAACATGGTTCGCACTGCTGTACGTGCTGTGACCCTTAATGTTTATCATGTTGGAGATGACTCTGTTAATAGATATATAACCAGTGCACCTCACACAGATTACTTCTCAAACCTGATTTCCTTTTTTAGGAAGCAGTGTATGGATTTAAATAGACTGGTCTCCGAGACACTGAGAAATCCAGGCCCAGATTCATCCTCTATAATTAATGCTGCTGTGGATGATATTGAGGATAACCTGTATTACTTCAGTGATGTTGTCTCTGCTGGAATTCCTGATGTTGGGAGGCTAATAACAGACAGCATTCTGATGCTTTTGATTTTTCCAATACTCCTTCCTTCCCTGAGGATAGTGGCTGTTAGTGACATGCAAAGTGGTGTTGTCACTTCTCTTTACTTACTTTGTTGCATCTTGAGGATAGTCAAGATCAAAGATTTGGCAAATACCATAGTTGCTGCTCTCTTTTATCCCTTAGAGGCCTTTGCAAAATGTTCTGGGGGTAAAGTCAATGGCTATATATCTGATCGCGGTTTTACATCTGAAATCCATAGGCCAGATAATGATAATCTAGCAAAGTGTAGTGCAGAAGGCTTGATGGTTGATGTGCCATACTCTTCTAGTTCAGGTTTTCATCCAGAAAGTGTTATGCTAAATAATTGTAGCAGTTCAAATTTGGCTTTAAGTGAGGTCTTACTTGCCTATGTAACTAATGGGGATGATCTACAAGTTTTGGGTTCCTTGAGCGTGCTTGCCACTCTGCTGCAAACTAAAGAACTTGATGAATCAATGCTAGATGGGCTTGGAATTCTTCCACAACGCAAACAGCACAAGAAACAATTATTGCAAGCATTGGTTGGTGAGGCTTCAGGTGAAGAGCAGCTTTTTTCTTCTGAAAGTAGCTTGATGAGGGATGGTATTGGTTGTGAGCTTGATGTCTATCTTGAAAAGATCAAGGAGCAGTATGGGATATCTTTTCAGCCTTCTGACGTGGGAACAAGCCCTCGTGTACCTAGATTTCAGGTGCTCGATGCATTAGTGAGCCTCTTTTGTCGTTCTAATATATCTGCAGAGACACTGTGGGATGGTGGTTGGCTTTTACGCCAGTTGCTTCCTTACAGCGAGGCAGAATTCAACAGCCATCACCTGGAATTGCTCAAGGTTGCATACAAGAATTCTGCTTCTGCTCTTGTAAAGGAGGTTAGAGGTTTCTGGCCCGATCTTCTTATCAAAGTTCTTTGTCATGAGTGGAGAAAGTGCAAAAGAGCAATGGAATCTTCATCCCCTCCAAAAGAACCAAAGTGCATACTTTTTCCACCCCATATGTTCTTTTCAGAAGAAGATTTGCCTGAGGGATCATCATTTTCTGCTGGAGAAAGAATGCATGAGTTGGTGAAGGTATTTGTACTTCTGCACCAACTTCAAATATTCACCCAGGGCAGAGCTTTGCCTGAGCAACCTCTTATTTATCCTCCTTGTGATCTTCCTGCAAATTCTCGTGCCCAAACTTCTGGACTTGATGTGTCATCATCCCCAAAGCCAGGCACTGAAATCAGCCTTGTTAATGCTGTGCCTTGTAGGATTGCTTTTGAGAGAGGCAAAGAGCGACATTTTTGCTTCCTAGCAATCTCTGTAGGAACATCTGGGTGGCTCATGCTTGCAGAAGAATTGCCTGTGAAGAAGCCCTATGGAGTAGTTCGGGTTGCTGCACCTTTGGCAGGGTGCAATCCCAGGGTTGATGAGAAACATTCAAGATGGTTACACCTGCGGATCAGACCATCCTCTTTACCTTTTCTGGATCCTGCCAAGTTCAATGCCTATGGGAAATTAAAGACAAAAGCTTTAGTGGATGGAAGATGGACGTTGGCTTTCAGGGATGAGGAGTCTTGCAAGTCCGCTTTATTCATGATTCTTGAAGAGATTAATTTTCTAAGTGACGAGGTTCATAGAAGAATAAAACCTTTGCTCAACCTTGAATCGGCTATAGATTCATCAAGCCCATCTGTAAGTGTTCCAGAGGATTCCTCTTCGGATACAACACCTTCCAATTCGTTGTAA 2583 0.4139 MWFTFWRSRDRFSLDQLRYLTDQLTKVQIVNEVNKDFVIEALRSIAELITYGDQHDASFFEFFMEKQVVGEFVRILKLSRTVSIPLQLLQTVSIMIQNLKSEHAIYYMFSNEHMNYLITYSFDFRNEELLSYYISFLRAISGKLNKNTISLLVKTCNDGVVSFPLYVEAIRYAFHEENMVRTAVRAVTLNVYHVGDDSVNRYITSAPHTDYFSNLISFFRKQCMDLNRLVSETLRNPGPDSSSIINAAVDDIEDNLYYFSDVVSAGIPDVGRLITDSILMLLIFPILLPSLRIVAVSDMQSGVVTSLYLLCCILRIVKIKDLANTIVAALFYPLEAFAKCSGGKVNGYISDRGFTSEIHRPDNDNLAKCSAEGLMVDVPYSSSSGFHPESVMLNNCSSSNLALSEVLLAYVTNGDDLQVLGSLSVLATLLQTKELDESMLDGLGILPQRKQHKKQLLQALVGEASGEEQLFSSESSLMRDGIGCELDVYLEKIKEQYGISFQPSDVGTSPRVPRFQVLDALVSLFCRSNISAETLWDGGWLLRQLLPYSEAEFNSHHLELLKVAYKNSASALVKEVRGFWPDLLIKVLCHEWRKCKRAMESSSPPKEPKCILFPPHMFFSEEDLPEGSSFSAGERMHELVKVFVLLHQLQIFTQGRALPEQPLIYPPCDLPANSRAQTSGLDVSSSPKPGTEISLVNAVPCRIAFERGKERHFCFLAISVGTSGWLMLAEELPVKKPYGVVRVAAPLAGCNPRVDEKHSRWLHLRIRPSSLPFLDPAKFNAYGKLKTKALVDGRWTLAFRDEESCKSALFMILEEINFLSDEVHRRIKPLLNLESAIDSSSPSVSVPEDSSSDTTPSNSL. 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03803 860 PANTHER UNCHARACTERIZED 1 838 IPR039272 -
Seca6g03803 860 MobiDBLite consensus disorder prediction 838 860 - -
Seca6g03803 860 Pfam Uncharacterised conserved protein 42 192 IPR019155 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03803 Seca-Chr6 105474523 105487521 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03803 K19513 - gmx:100789779 1426.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03803 6 105474523 105487521 Seca6g03803 6 105474523 105487521 ECH