Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03785 ATGGCCTCATCTGCTAGATTCATGCTAACAGCTATGGCGGTGATAGCTTTAGCAACCTCTCTCTATTCAGATTCTGCTTCTGCTTCATCCGTGGGCGAGTTCGTCGACAAGACCATCACTTCCCACAAGATCGTCATCTTTTCAAAGACCTATTGCCCATACTGTAAAAGAGCAAAAGCTGTATTTGAAGAGTTGAATCAAGTGCCACATATTGTAGAACTTGATGAGAGAGGTATACTGAGAACTTTAACTTGCTTACTTTTTTTCTTTAAAAAATATAGCATGTTTATACTGCATAAGAATGGTAAGGGGGTCATAGCTGTTGCTGAGACAGTGAGACTTTTTTTTGCAGATGATGGTTCAAAAATTCAGGATATCCTGACTAATATTGTTGGGAGACGTACTGTGCCACAAGTTTTCATTAATGGAAAACACCTGGGAGGCTCAGATGATACCCTTGAAGCTTATCAGAGTGGACGTCTGGCTAAACTCCTAGGAATTGAAACAAAGGTTCATGATGATCTCTAA 528 0.4015 MASSARFMLTAMAVIALATSLYSDSASASSVGEFVDKTITSHKIVIFSKTYCPYCKRAKAVFEELNQVPHIVELDERGILRTLTCLLFFFKKYSMFILHKNGKGVIAVAETVRLFFADDGSKIQDILTNIVGRRTVPQVFINGKHLGGSDDTLEAYQSGRLAKLLGIETKVHDDL. 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03785 175 PANTHER GLUTAREDOXIN 2 16 166 - -
Seca6g03785 175 Gene3D Glutaredoxin 22 166 - -
Seca6g03785 175 SUPERFAMILY Thioredoxin-like 33 165 IPR036249 -
Seca6g03785 175 Pfam Glutaredoxin 118 145 IPR002109 -
Seca6g03785 175 Pfam Glutaredoxin 44 79 IPR002109 -
Seca6g03785 175 ProSiteProfiles Glutaredoxin domain profile. 32 172 - -
Seca6g03785 175 ProSitePatterns Glutaredoxin active site. 46 61 IPR011767 -
Seca6g03785 175 CDD GRX_GRXh_1_2_like 43 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03785 Seca-Chr6 105217743 105220068 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03785 K03676 - gmx:100777703 189.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03785 6 105217743 105220068 Seca6g03785 6 105217743 105220068 ECH