Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03752 ATGGGCGATAACAATTCTCCATCTGGGTCTCCAAAGGCAAAACCAGATCTAGTTGATGGAGACACGGCTGGTTCCAAGGTTGATACCTCTTTGGAAACGATCGTACGAAGTTTCCAAGATTCAATGTCTCTTGGCAAGAAACACAAGTTCTGGGAAAATCAACCCGTTGGGCAATACAAGGATCTCGGGAACACAAGCTTACCCGAAGGCCCCATTGAGCCCCCAACACCCTTATCTGAAGTCAAGCAGGAACCTTACAACCTTCCAAGCGCTTATGAATGGACCATGTGTGACATGGACTCTGGAGAAACATGTGATGAGGTTTATCTTCTGCTGAAGAATAATTATGTTGAGGATGATGAGAACATGTTCAGGTTCAACTATTCCAAGGAGTTTTTGAGATGGGCCTTGCGTGTTCCTGGTTATTACAGGAGTTGGCACATCGGGGTTCGGGCCAAAGCTTCAAAGAAGTTGGTTGCTTTCATCAGTGGAGTCCCTGCCAGGATCAGGGTGAATGACAAGCTTGTGAAAATGGCAGAGATCAATTTCTTATGTGTGCATAAGAAGCTTAGATCAAAGAGACTTGCACCTGTTATGATCAAGGAAATTACTAGGAGGGTTCATTTGGAGAATATTTGGCAAGCAGCTTACACAGCTGGGGTTGTTCTTCCAACTCCAATAACAACTTGTCAGTATTGGCATAGGTCCTTGAATCCAAAGAAGCTTATTGATGTTGGGTTTTCCAGGCTTGGTGCTAGGATGACAATGAGCCGCACTATAAAACTTTACAAATTACCTGAGTCTACAATTACTACTGGATTCAGGAAAATGGAACTCCGGGATGTCCCTTCTGTTACTCAGTTGCTTAGGAACTACTTGAGCCAGTTTGTTGTTGCACCTGATTTTGATGAAAGTGATGTTGAGCATTGGCTTCTTCCCACTGAAAATGTGGTGGATAGTTTTGTGGTTGAGAGTCCTGACAATCATGAGATTACAGACTTCTGCAGCTTCTACACTCTCCCTTCTTCTATCCTTGGAAATCAAAATTACACAACGTTGAAAGCTGCTTATTCTTATTACAATGTGTCCACAAAAACTCCACTGACTCAGTTAATGAATGATGCACTAATTGTAGCAAAGCAAAAGGATTTTGATGTTTTCAATGCATTGGATGTAATGCATAATGAGAATTTCCTCAAAGAGCTAAAGTTTGGACCTGGAGATGGACAACTTCACTACTACTTGTACAATTATAGGATTCCTAATGCCTTGAAACCATCTGAACTTGGGCTTGTGCTCTTGTAG 1305 0.423 MGDNNSPSGSPKAKPDLVDGDTAGSKVDTSLETIVRSFQDSMSLGKKHKFWENQPVGQYKDLGNTSLPEGPIEPPTPLSEVKQEPYNLPSAYEWTMCDMDSGETCDEVYLLLKNNYVEDDENMFRFNYSKEFLRWALRVPGYYRSWHIGVRAKASKKLVAFISGVPARIRVNDKLVKMAEINFLCVHKKLRSKRLAPVMIKEITRRVHLENIWQAAYTAGVVLPTPITTCQYWHRSLNPKKLIDVGFSRLGARMTMSRTIKLYKLPESTITTGFRKMELRDVPSVTQLLRNYLSQFVVAPDFDESDVEHWLLPTENVVDSFVVESPDNHEITDFCSFYTLPSSILGNQNYTTLKAAYSYYNVSTKTPLTQLMNDALIVAKQKDFDVFNALDVMHNENFLKELKFGPGDGQLHYYLYNYRIPNALKPSELGLVLL. 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03752 434 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 1. 180 188 IPR022678 GO:0004379
Seca6g03752 434 Pfam Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain 244 422 IPR022677 GO:0004379
Seca6g03752 434 PANTHER N-MYRISTOYL TRANSFERASE 38 434 IPR000903 GO:0004379|GO:0006499
Seca6g03752 434 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 232 434 IPR016181 -
Seca6g03752 434 Gene3D - 40 434 - -
Seca6g03752 434 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 46 231 IPR016181 -
Seca6g03752 434 Pfam Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain 71 230 IPR022676 GO:0004379
Seca6g03752 434 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 2. 403 409 IPR022678 GO:0004379
Seca6g03752 434 FunFam Glycylpeptide N-tetradecanoyltransferase 40 434 - -
Seca6g03752 434 MobiDBLite consensus disorder prediction 1 28 - -
Seca6g03752 434 PIRSF N-myristl_transf 4 434 IPR000903 GO:0004379|GO:0006499
Seca6g03752 434 FunFam Glycylpeptide N-tetradecanoyltransferase 45 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03752 Seca-Chr6 104824886 104826877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03752 1 434 Acyl Lipid Metabolism Gene Families AT5G57020 83.180 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03752 K00671 - gmx:100789104 802.357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03752 6 104824886 104826877 Seca6g03752 6 104824886 104826877 ECH