Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03696 ATGGTCCAGCAAACAGTTAATGAAAGATTTGGCAAATGCTTGCTTGAGTTAAGTGGTAACAATGCAATAATAGTCATGGATGATGCAGACATCAAACTGGCTGTACGCTCTATTTTGTTTGCAGCTGTGGGTACTGCTGGTCAGCGGTGTACAACCTGCCGTAGACTGTTTCTGCATGAGAGTATATATACAAATGTACTGGATCAACTTGTTGGAGTCTACAAACAAGTCAAAATTGGAAACCCCTTGGAGAAAGGGACTCTAGTTGGGCCTTTGCATACTCGTTCTTCAGTGGAAAACTTTCAGAAGGGTATCTCAGTCATAAAATCTCAGGGAGGGAAGATCCTAACTGGTGGATCTGTATTAGAGTCAGACGGAAATTTTGTACAGCCAACAATTGTTGAGATTTCTCCAGATGCTCCTGTAGTTAAAGAAGAATTGTTTGCTCCAGTTCTCTATGTTATGAAATTTCAGACTCTGGAAGAAGCAATTGCCTTGAACAATTCTGTACCTCAAGGATTGAGTAGTTCAATCTTTACACAAAGACCTGAAGCTATATTCAAATGGATCGGGCCACGAGGTAGTGATTGTGGTATAGTGAATGTGAACATACCAACAAATGGAGCTGAGATTGGAGGTGCCTTTGGTGGAGAAAAGGCAACTGGTGGTGGTCGTGAAGCAGGAAGTGATTCCTGGAAGCAATACATGCGGCGTTCTACATGTACCATCAATTATGGAAGTGAACTACCATTAGCTCAGGGAATAAACTTTGGTTAG 777 0.4183 MVQQTVNERFGKCLLELSGNNAIIVMDDADIKLAVRSILFAAVGTAGQRCTTCRRLFLHESIYTNVLDQLVGVYKQVKIGNPLEKGTLVGPLHTRSSVENFQKGISVIKSQGGKILTGGSVLESDGNFVQPTIVEISPDAPVVKEELFAPVLYVMKFQTLEEAIALNNSVPQGLSSSIFTQRPEAIFKWIGPRGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGSELPLAQGINFG. 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03696 258 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 1 258 IPR044638 GO:0004029
Seca6g03696 258 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 15 22 IPR029510 GO:0016491
Seca6g03696 258 FunFam Alpha-aminoadipic semialdehyde dehydrogenase 19 210 - -
Seca6g03696 258 SUPERFAMILY ALDH-like 2 246 IPR016161 GO:0016491
Seca6g03696 258 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 235 IPR016162 GO:0016491
Seca6g03696 258 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 19 210 IPR016163 GO:0016620
Seca6g03696 258 Pfam Aldehyde dehydrogenase family 2 238 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03696 Seca-Chr6 104216110 104219346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03696 1 258 Acyl Lipid Metabolism Gene Families AT1G54100 83.333 2.00e-158 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03696 K14085 - gmx:547717 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03696 6 104216110 104219346 Seca6g03696 6 104216110 104219346 ECH