Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03660 ATGAGAACGTCGTCGTTTGGGAGGTGCAGCACCGGCGAACTCGACTTACCGGACAATTTCGGAACCTCGTCGCCGGCGTCGGGAGGACATGCCTACGGCGCTATGTTGCCGGTTTTCCTCAACGACCTCCGAAGCAACCACCACAAGGAGCTCGTTGAGATCACCTTGGAGCTCGAAGACGACGCCGTAGTGCTCCGAAACATCGCGCCCGCCGCCGTCGCATCTTCCGCTCCCAACGCTTCGCCGTCGTCGAGTCCCGCCGTCGGAGACCATGGCGGAGGCGGTGCCATCGCGAGGAGCCTGTCGATTACGTCGAGGATTCGGAGGAAGTTCCCGTGGCTGCGGTCGATGTCGTCGCGGACCTCGGTGTCTTCATCGGAGAGTGTCGCCGTCGTCGAAGATCCGGTGGTGAGCGCGCGAAATGCTCGGAAAATGAGAGCGAAGCTTGAACGGACGAGATCGAGCGCGCAGAGAGCTCTGAAAGGTTTGAGATTCATCAGCAAGTCCGGCGAAGCCATGGAGGAGTTATGGAGAAAAGTGGAAGAGAGGTTCAGCTTGCTGGCTAAAGATGACTTGCTCGCTAGAGAAGACTTTGGTGAATGCATTGTTAAAGGGATGGAGGATTCAAAGGAATTTGCGGTGGGTATATTTGATGCATTAGCTCGAAGGAAGGAAAGAAAAGTGAGCAAGATAACCAAAGAAGAGCTGCGTCAATTCTGGTTGCAAATTTCGGACCAGAGCTTTGATGCTCGCCTTCAGATTTTCTTTGACATTATATTATGTTTTGATCATATTCTCTGTTTTCAATTTATTCAACAGCTCATAATGCTCAGTGCTTCTGCAAACAAGCTATCGAAGCTAAAAGAACAAGCTGAAGGATACGCTGCGTTAATAATGGAGGAATTGGATCCGGAAAACCTGTTTTTGCCTTTTATTCAGCTTTGGCAGCTAGAAATGTTATTACTACAGAAAGATAGGTACATGAACTACAGCAGACAACTCAGCACCACAAGTATAAACTGGAGTCAAAATATGAACGGTTTGAGACCCAGAAATGAGATCCAAAGATTGCGCAGGACACTCCAATGTCTTGCATTAGAATATTGGAGGAGGGGCTGGGTATTGCTATTGTGGTTAGTTACCACTGCTTGCCTTTTTGCTTGGAAATTTTACCAGTATAGAAACAGATCAAGTTTCCACGTCATGGGCTACTGCTTACCGGTAGCCAAAGGTGCTGCAGAGACACTGAAGCTCAACATGGCTCTTATCCTTTTACCAGTTTGTCGAAACACATTGACATGGCTTCGCTCTTCAGGAGCCAGGAAATTTGTCCCCTTCGATGACAATATTAATTTCCACAAGATAATTGCATTTGCCATAGCTGTTGGAGTCGTTGTTCATGCAGGCAATCATCTGGCATGCGATTTCCCCCTTCTAATAAATTCATCTCCAGAAAAATTTTCACTTATAGCTTCGGATTTCAATAACAAAAAGCCCACATATAAAAAACTTCTGACCGGTGTAGAAGGCGTAACTGGAATTTCAATGGTTACTTTGATGGCTATTTCTTTTACTCTAGCAACTCACCACTTCCGGAGAAATGCAGTCAGGCTTCCTCCACCTTTCAACAGATTGACGGGCTTCAATGCATTCTGGTACTCACACCACCTTTTCGGTGTTGTCTATGTTCTGCTGTTCATCCATGGAGCATTTTTGAATCTAACCCATCAGTGGTACAAGAAAACGACATGGATGTATATCTCTGTTCCACTGTTGCTGTACATAGCAGAGCGAACTCTACGAACTCGTAGATCAAAGCATTATGCGGTAAAAATTCAGAAGGTTTCGGTTCTACCAGGAAATGTCTTTAGCTTAATCATGTCCAAGCCTAATGGATTTAAGTACAAAAGCGGACAGTACATATTTTTACAATGCCCAAAAATCTCTCCGTTTGAGTGGCACCCATTCTCCATCACCTCAGCACCAGGAGATGATTACCTAAGTGTTCATATTCGCACAGTAGGAGACTGGACGCAAGAACTTAAGTTCCTTTTCACCGAGGATGAAAAACTACCTTCGGTTAATCGTCGTGTAACATTTGGTGAACTAGTGCAAATGGAACAAAGAGGACAGCCAAGACTGCTTGTTGATGGTCCTTACGGAGCTCCAGCTCAAGATTACCAGAATTTTGATGTACTGCTCCTTATAGGATTAGGAATTGGAGCAACTCCTTTCATTAGCATTCTCAGGGATCTTCTCAATGGCACGAGAACAATTGAGGAACTTATAAATTTTTGTAAGGTTCAGGTGCAGGAGTCAAACACAGAAACAACCAGATCAGATGAGAGCTTCAATAGTTTTACATCCTCAATTTTGACGCCTGGAGGAAATAAAAAATCACAAAGGACTACAAATGCTTATTTCTATTGGGTAACCAGGGAACCTGGATCTTTTGAATGGTTTAAAGGAGTAATGGATCAAGTTGCAGAAATGGACCACAAAGGTCAAATTGAACTTCACAACTATCTTACAAGTGTCTATGAAGAGGGGGATGCGAGATCAACTCTAATCACCATGATCCAAGCACTAAACCATGCCAAACATGGTGTTGACATCCTATCAGGCACTAGAGTGAGGACACACTTTGCTCGGCCTAATTGGAAAGAAGTTTTCACCAAGATAGCCTCAAAACATCCGTATTCTACAGTAGGTAAATTACTTGCTACAAAGTGCAGAACTATTTCCCACAAAGGAGATTCAAATTTTCCATTTTCTTCCTGCAATATTGGGTTAGCAAATAATTGCTATTAA 2811 0.4454 MRTSSFGRCSTGELDLPDNFGTSSPASGGHAYGAMLPVFLNDLRSNHHKELVEITLELEDDAVVLRNIAPAAVASSAPNASPSSSPAVGDHGGGGAIARSLSITSRIRRKFPWLRSMSSRTSVSSSESVAVVEDPVVSARNARKMRAKLERTRSSAQRALKGLRFISKSGEAMEELWRKVEERFSLLAKDDLLAREDFGECIVKGMEDSKEFAVGIFDALARRKERKVSKITKEELRQFWLQISDQSFDARLQIFFDIILCFDHILCFQFIQQLIMLSASANKLSKLKEQAEGYAALIMEELDPENLFLPFIQLWQLEMLLLQKDRYMNYSRQLSTTSINWSQNMNGLRPRNEIQRLRRTLQCLALEYWRRGWVLLLWLVTTACLFAWKFYQYRNRSSFHVMGYCLPVAKGAAETLKLNMALILLPVCRNTLTWLRSSGARKFVPFDDNINFHKIIAFAIAVGVVVHAGNHLACDFPLLINSSPEKFSLIASDFNNKKPTYKKLLTGVEGVTGISMVTLMAISFTLATHHFRRNAVRLPPPFNRLTGFNAFWYSHHLFGVVYVLLFIHGAFLNLTHQWYKKTTWMYISVPLLLYIAERTLRTRRSKHYAVKIQKVSVLPGNVFSLIMSKPNGFKYKSGQYIFLQCPKISPFEWHPFSITSAPGDDYLSVHIRTVGDWTQELKFLFTEDEKLPSVNRRVTFGELVQMEQRGQPRLLVDGPYGAPAQDYQNFDVLLLIGLGIGATPFISILRDLLNGTRTIEELINFCKVQVQESNTETTRSDESFNSFTSSILTPGGNKKSQRTTNAYFYWVTREPGSFEWFKGVMDQVAEMDHKGQIELHNYLTSVYEEGDARSTLITMIQALNHAKHGVDILSGTRVRTHFARPNWKEVFTKIASKHPYSTVGKLLATKCRTISHKGDSNFPFSSCNIGLANNCY. 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03660 936 Gene3D - 149 261 - -
Seca6g03660 936 FunFam Respiratory burst oxidase homolog A 596 688 - -
Seca6g03660 936 Gene3D Translation factors 594 691 - -
Seca6g03660 936 Pfam FAD-binding domain 608 723 IPR013112 GO:0016491
Seca6g03660 936 Gene3D - 721 922 IPR039261 -
Seca6g03660 936 SUPERFAMILY Riboflavin synthase domain-like 607 723 IPR017938 -
Seca6g03660 936 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 605 726 IPR017927 GO:0016491
Seca6g03660 936 Pfam Ferric reductase NAD binding domain 730 904 IPR013121 GO:0016491
Seca6g03660 936 SFLD NADPH oxidase subgroup (NOX) 143 926 - -
Seca6g03660 936 MobiDBLite consensus disorder prediction 74 93 - -
Seca6g03660 936 Coils Coil 139 159 - -
Seca6g03660 936 PANTHER NADPH OXIDASE 212 926 - -
Seca6g03660 936 Pfam Respiratory burst NADPH oxidase 148 250 IPR013623 GO:0004601|GO:0050664
Seca6g03660 936 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 713 846 IPR039261 -
Seca6g03660 936 Pfam Ferric reductase like transmembrane component 411 565 IPR013130 -
Seca6g03660 936 CDD NOX_Duox_like_FAD_NADP 614 891 - -
Seca6g03660 936 PRINTS Cytochrome B-245 heavy chain signature 456 474 IPR000778 GO:0016020|GO:0016491
Seca6g03660 936 PRINTS Cytochrome B-245 heavy chain signature 735 752 IPR000778 GO:0016020|GO:0016491
Seca6g03660 936 PRINTS Cytochrome B-245 heavy chain signature 548 568 IPR000778 GO:0016020|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03660 Seca-Chr6 103831405 103839719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03660 23 924 Miscellaneous Gene Families AT1G19230 59.769 0.0 1077
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03660 K13447 - gmx:100805697 1474.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03660 6 103831405 103839719 Seca6g03660 6 103831405 103839719 ECH