Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03633 ATGGAGGACCAGTCATCGTCAACACCAAAGACTGAAGCTTTGGACGCTCCCCTTCATTCAATTGGATTTGAGATTCAAGAGTTATCACCAGAGAGAGTTTCTGGCCGTCTCCATGTTACCCACAAGTGCTGCCAGCCATTTAAGGTGCTCCATGGAGGGGTATCAGCAATGATAGCAGAGGCTCTTGCAAGCATGGGAGCACATATGGCTTGTGGTTATCAAAGAGTGGCAGGAATTCAACTCAGCATCAACCATTTGAAACGAGCAGAGATGGGTGACCTTGTCCACGCAGAAGCTACCCCTTTAAATGTCGGCAAAACCATTCAGGTGCGTCTCTCTCTCTCTCTTACAATTCTATTTTCTCAAATTCCATTAAATACAAATACAGAAGTGTGGGAGGTAAGAATCTGGAAGATTGATCCTTCAAACTCACAAAAGAGATCATTGGTATCATCTTCAAGGGTAACTCTATTAAGCAACATGCCTGTCCCAGATCATGCCAAAGATGCCGGTGACATGCTAAAGAAGTATGCAAAACTGTAA 543 0.442 MEDQSSSTPKTEALDAPLHSIGFEIQELSPERVSGRLHVTHKCCQPFKVLHGGVSAMIAEALASMGAHMACGYQRVAGIQLSINHLKRAEMGDLVHAEATPLNVGKTIQVRLSLSLTILFSQIPLNTNTEVWEVRIWKIDPSNSQKRSLVSSSRVTLLSNMPVPDHAKDAGDMLKKYAKL. 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03633 180 CDD PaaI_thioesterase 21 110 - -
Seca6g03633 180 Gene3D Hotdog Thioesterase 2 115 - -
Seca6g03633 180 NCBIfam hotdog fold thioesterase 20 110 IPR003736 -
Seca6g03633 180 Pfam Thioesterase superfamily 48 110 IPR006683 -
Seca6g03633 180 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 19 111 IPR029069 -
Seca6g03633 180 PANTHER 1,4-DIHYDROXY-2-NAPHTHOYL-COA THIOESTERASE 1 2 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03633 Seca-Chr6 103610040 103614671 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03633 K19222 - gmx:100527403 242.276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03633 6 103610040 103614671 Seca6g03633 6 103610040 103614671 ECH