Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03597 ATGGCGTCCTCTGATCCCAACAAGCTGTTAACCAAAGCTGATAAGCTAACAAGACTCAGTCTCACGAGGTGGAGTGCAGATTGGAAAACTGCTACTGGTCTTTATGAGCAGGCTGCTAATGGATTTAGGCTCGCCAAGGACCATGAGAAAGCCAAAATTGCATATGAAAAAGCTTCAAAAGGACAAGAGATGCTTTCTTCACCTTGGGATGCAGCTAAGCATATGGAATCTGCTGCTGCTCTGGCCAAGGATCTGAGCAACTGGCAAGAAGTTGGTGACTTCTATCGAAAGGCATCTGAATTGTACATGGAGTGTGGGAGACCACAACCTGCATCAGATGCTCTCGCAAAGGGAGCCCGTGCTTTGGAAGATACCGTGCCTGAAGAAGCTATTCAGCTATATACAGATGCTTGTACAATTCTTGAAGAGGATGGAAGGGAACAGATGGCCTTTGATCTATATCGTGCTGCCACTAGTGTTTATATAAAACTTGAGAAATATACAGATGCTGCATCATTCCTGTTGAGATTGGGCTTGTCAGCTGACAAGTGTAATGCTACCAATAGTCAGTGCAAGGCATATCTTAGTGCAATTATTGTCTACCTTTATGCTCATGACTTTAAGCAAGCAGAGAAGTGCTATAATGACTGCTCTCAGTAA 660 0.4409 MASSDPNKLLTKADKLTRLSLTRWSADWKTATGLYEQAANGFRLAKDHEKAKIAYEKASKGQEMLSSPWDAAKHMESAAALAKDLSNWQEVGDFYRKASELYMECGRPQPASDALAKGARALEDTVPEEAIQLYTDACTILEEDGREQMAFDLYRAATSVYIKLEKYTDAASFLLRLGLSADKCNATNSQCKAYLSAIIVYLYAHDFKQAEKCYNDCSQ. 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03597 219 Gene3D Tetratricopeptide repeat domain 3 219 IPR011990 GO:0005515
Seca6g03597 219 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 1 219 IPR000744 GO:0006886
Seca6g03597 219 SUPERFAMILY TPR-like 7 216 IPR011990 GO:0005515
Seca6g03597 219 Pfam Soluble NSF attachment protein, SNAP 5 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03597 Seca-Chr6 103274885 103280903 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03597 K21198 - gmx:100790986 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03597 6 103274885 103280903 Seca6g03597 6 103274885 103280903 ECH